RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
PCM1-206ENST00000518537 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
PCM1-206ENST00000518537 LEPP41159 167 aa12.42□□□□□ -0.42
PCM1-206ENST00000518537 GSN-AS1Q9NRJ2 163 aa12.42□□□□□ -0.42
PCM1-206ENST00000518537 TSSC4Q9Y5U2 329 aaPredicted RBP12.42□□□□□ -0.42
PCM1-206ENST00000518537 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
PCM1-206ENST00000518537 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
PCM1-206ENST00000518537 S100A12P80511 92 aa12.41□□□□□ -0.42
PCM1-206ENST00000518537 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
PCM1-206ENST00000518537 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
PCM1-206ENST00000518537 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
PCM1-206ENST00000518537 CITED2Q99967 270 aaPredicted RBP12.41□□□□□ -0.42
PCM1-206ENST00000518537 AKAP9Q99996 3911 aa12.41□□□□□ -0.42
PCM1-206ENST00000518537 KLLNB2CW77 178 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 D6R8Y8 96 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 H3BVH4 76 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 OR10AG1Q8NH19 301 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 CHCHD1Q96BP2 118 aaKnown RBP12.4□□□□□ -0.42
PCM1-206ENST00000518537 ODF3Q96PU9 254 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 M0R2Z0 102 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 CCL24O00175 119 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 SNAI2O43623 268 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 ASIPP42127 132 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 CACNG7P62955 275 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 PRELID3AQ96N28 172 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
PCM1-206ENST00000518537 U3KQK5 164 aa12.4□□□□□ -0.42
PCM1-206ENST00000518537 NDUFA7O95182 113 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 LINC00614P0C842 121 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 S100A4P26447 101 aaKnown RBP12.39□□□□□ -0.43
PCM1-206ENST00000518537 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 KRTDAPP60985 99 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 RNF114Q9Y508 228 aa12.39□□□□□ -0.43
PCM1-206ENST00000518537 ACANP16112 2415 aa12.38□□□□□ -0.43
PCM1-206ENST00000518537 CKS2P33552 79 aa12.38□□□□□ -0.43
PCM1-206ENST00000518537 FHL3Q13643 280 aa12.38□□□□□ -0.43
PCM1-206ENST00000518537 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
PCM1-206ENST00000518537 C7orf71A4D174 169 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 DEFB114Q30KQ6 69 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 RAB4AP20338 218 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 TSPOP30536 169 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 DEFB131AP59861 70 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 PRSS3P2Q8NHM4 247 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
PCM1-206ENST00000518537 SMKR1H3BMG3 65 aa12.36□□□□□ -0.43
PCM1-206ENST00000518537 GNRH2O43555 120 aa12.36□□□□□ -0.43
PCM1-206ENST00000518537 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
PCM1-206ENST00000518537 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
PCM1-206ENST00000518537 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
PCM1-206ENST00000518537 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 BAHCC1Q9P281 2608 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 NCR2O95944 276 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 PPBPP02775 128 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 PMCHL1Q16048 86 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 KNCNA6PVL3 124 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 INAFM1C9JVW0 142 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 CDKN1BP46527 198 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 SPINK13Q1W4C9 94 aa12.35□□□□□ -0.43
PCM1-206ENST00000518537 CD300EQ496F6 205 aaPredicted RBP12.35□□□□□ -0.43
PCM1-206ENST00000518537 ANK3Q12955 4377 aaKnown RBP12.34□□□□□ -0.43
PCM1-206ENST00000518537 TRAV12-2A0A075B6T6 113 aa12.34□□□□□ -0.43
PCM1-206ENST00000518537 IGHV1-24A0A0C4DH33 117 aa12.34□□□□□ -0.43
PCM1-206ENST00000518537 C3orf79P0CE67 100 aa12.34□□□□□ -0.43
PCM1-206ENST00000518537 EVI2AP22794 236 aa12.34□□□□□ -0.43
PCM1-206ENST00000518537 OR4C46A6NHA9 309 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 M0R381 172 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 PROK1P58294 105 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 NPYP01303 97 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 IFI27P40305 119 aaPredicted RBP12.33□□□□□ -0.44
PCM1-206ENST00000518537 AP5S1Q9NUS5 200 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 SIGLEC8Q9NYZ4 499 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
PCM1-206ENST00000518537 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 SPRY2O43597 315 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 RNASE3P12724 160 aaKnown RBP12.32□□□□□ -0.44
PCM1-206ENST00000518537 PKIAP61925 76 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
PCM1-206ENST00000518537 PRO1933Q9H354 126 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 SCRT2Q9NQ03 307 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 TCF21O43680 179 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 CD7P09564 240 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
PCM1-206ENST00000518537 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
PCM1-206ENST00000518537 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
PCM1-206ENST00000518537 H3BMM0 161 aa12.3□□□□□ -0.44
PCM1-206ENST00000518537 LEPROTL1O95214 131 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms