RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 C1orf50Q9BV19 199 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 CHST6Q9GZX3 395 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 HES4Q9HCC6 221 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 PKIGQ9Y2B9 76 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 CARHSP1Q9Y2V2 147 aaKnown RBP1.7□□□□□ -2.14
CPNE3-204ENST00000517862 UFC1Q9Y3C8 167 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 V9GYQ6 96 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 IGKV2-28A0A075B6P5 120 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 H3BQ85 93 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 SH2D1AO60880 128 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 IGKV2D-28P01615 120 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 APELAP0DMC3 54 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 MAGEA12P43365 314 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 SULT1A1P50225 295 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 DEFA1P59665 94 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 IFITM2Q01629 132 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 LTC4SQ16873 150 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 RRN3P1Q2M238 152 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 LGALSLQ3ZCW2 172 aaPredicted RBP1.69□□□□□ -2.14
CPNE3-204ENST00000517862 C10orf91Q5T1B1 145 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 HIST1H2BAQ96A08 127 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 ROPN1LQ96C74 230 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 ZC2HC1AQ96GY0 325 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 CMTM6Q9NX76 183 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 ANGPT4Q9Y264 503 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 TRAPPC1Q9Y5R8 145 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 PXMP4Q9Y6I8 212 aa1.69□□□□□ -2.14
CPNE3-204ENST00000517862 IGKV1D-37A0A075B6S9 117 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 IGSF23A1L1A6 192 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 FAM223BA6NKX1 122 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 IBA57-AS1B1ANH7 110 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 ZNF878C9JN71 531 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 INMT-MINDY4F8WBC2 141 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 GSTZ1O43708 216 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-204ENST00000517862 NDUFA3O95167 84 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 KRT75O95678 551 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 PFN1P07737 140 aaKnown RBP1.68□□□□□ -2.14
CPNE3-204ENST00000517862 MYL12AP19105 171 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 ALOX5APP20292 161 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 KRTAP12-2P59991 146 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 PMAIP1Q13794 54 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 KRTAP25-1Q3LHN0 102 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 DNLZQ5SXM8 178 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 FAM78BQ5VT40 261 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 SPINT4Q6UDR6 99 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 NIT1Q86X76 327 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 FAM223AQ8IWN6 122 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 OR6V1Q8N148 313 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 ZFAND2AQ8N6M9 145 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 Q8TAT8 98 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 AQP3Q92482 292 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 SLC35B4Q969S0 331 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 PYURFQ96I23 114 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 CYYR1Q96J86 154 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 ZNF2Q9BSG1 426 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-204ENST00000517862 IL20Q9NYY1 176 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 ANAPC10Q9UM13 185 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 PRELID3BQ9Y3B1 194 aa1.68□□□□□ -2.14
CPNE3-204ENST00000517862 SAMHD1Q9Y3Z3 626 aaKnown RBP1.68□□□□□ -2.14
CPNE3-204ENST00000517862 TRBV24-1A0A075B6N3 115 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 LINC00862A6NCI5 91 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 J3QRK9 145 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 CHP2O43745 196 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 SLC25A20O43772 301 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 PRH1P02810 166 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 FAM228BP0C875 321 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 FGF6P10767 208 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 ESDP10768 282 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 CRABP1P29762 137 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 DDTP30046 118 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 MARCKSL1P49006 195 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 RAB5BP61020 215 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 HOXC5Q00444 222 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 FXYD3Q14802 87 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 LYPD5Q6UWN5 251 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 SLC35F6Q8N357 371 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 FAM24BQ8N5W8 94 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 ZNF439Q8NDP4 499 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 OR1L8Q8NGR8 309 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 OR4K13Q8NH42 304 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 STAG3L4Q8TBR4 150 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 RAB2BQ8WUD1 216 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 RMI2Q96E14 147 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 SLC35G5Q96KT7 338 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 OR51I2Q9H344 312 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 FKBP14Q9NWM8 211 aa1.67□□□□□ -2.14
CPNE3-204ENST00000517862 A0A1B0GVG6 124 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 KPNA4O00629 521 aaPredicted RBP1.66□□□□□ -2.14
CPNE3-204ENST00000517862 SULT1C4O75897 302 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 MT-CO2P00403 227 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 DBIP07108 87 aaKnown RBP1.66□□□□□ -2.14
CPNE3-204ENST00000517862 CRYBB3P26998 211 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 G0S2P27469 103 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 ERP29P30040 261 aaKnown RBP1.66□□□□□ -2.14
CPNE3-204ENST00000517862 SERPINB10P48595 397 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 DHRS2Q13268 280 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 SPA17Q15506 151 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 FAM229BQ4G0N7 80 aa1.66□□□□□ -2.14
CPNE3-204ENST00000517862 HACD4Q5VWC8 232 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms