RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 NEGR1Q7Z3B1 354 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 INO80EQ8NBZ0 244 aaPredicted RBP5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 TMEM37Q8WXS4 190 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 C8orf49Q96NF6 230 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MGST2Q99735 147 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 V9GYH0 126 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 MUC4Q99102 2169 aa5.09□□□□□ -1.59
TNFRSF11B-202ENST00000517352 IGHV1OR15-1A0A075B7D0 117 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 M0R3E3 92 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ZNF253O75346 499 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ZNF324O75467 553 aaPredicted RBP5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MBPP02686 304 aaPredicted RBP5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 BTN1A1Q13410 526 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ICAM4Q14773 271 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ATP6V1FQ16864 119 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 UQCC3Q6UW78 93 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 EXOC3-AS1Q8N2X6 119 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MRPL53Q96EL3 112 aaKnown RBP5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ST6GAL2Q96JF0 529 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TXNDC17Q9BRA2 123 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SLC25A31Q9H0C2 315 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KCNIP2Q9NS61 270 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MRPL16Q9NX20 251 aaKnown RBP5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KLF12Q9Y4X4 402 aa5.08□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TRBV19A0A075B6N1 114 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 RNF222A6NCQ9 220 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FAM24AA6NFZ4 105 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C9JCJ5 164 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 M0R036 132 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 VCYO14598 125 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MRPS12O15235 138 aaKnown RBP5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 HSBP1O75506 76 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ORM1P02763 201 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 RPL29P47914 159 aaKnown RBP5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SULT1A1P50225 295 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NKX2-5P52952 324 aaPredicted RBP5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 CD300CQ08708 224 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PDE6HQ13956 83 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ANXA2RQ3ZCQ2 193 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MUC21Q5SSG8 566 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IBA57Q5T440 356 aaKnown RBP5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LYPD5Q6UWN5 251 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C10orf126Q8N4M7 172 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 CMTM2Q8TAZ6 248 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MAP1LC3CQ9BXW4 147 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 AGPAT4-IT1Q9H0P7 198 aa5.07□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TRGV11A0A075B6L2 103 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IGKV2-40A0A087WW87 121 aaPredicted RBP5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IGLV5-52A0A0A0MRZ9 124 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 H3BS24 57 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 K7EP13 123 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 OR7C2O60412 319 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SPINK4O60575 86 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IGKV2D-40P01614 121 aaPredicted RBP5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 CRYGDP07320 174 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NMBP08949 121 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NBEAP1P0C6P0 100 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PYYP10082 97 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FUSP35637 526 aaKnown RBP eCLIP5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ZNF138P52744 262 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 CRYBA4P53673 196 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TCL1AP56279 114 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ARL16Q0P5N6 197 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FAM74A1Q5RGS3 127 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 Q5VSD8 79 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MORN5Q5VZ52 161 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 VSIG2Q96IQ7 327 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C2orf50Q96LR7 162 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 HYLS1Q96M11 299 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C18orf15Q96N68 181 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ATP5SQ99766 215 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 OR51M1Q9H341 326 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MSRB1Q9NZV6 116 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TMEM14CQ9P0S9 112 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 WDR83OSQ9Y284 106 aa5.06□□□□□ -1.6
TNFRSF11B-202ENST00000517352 A0A087WTM6 91 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TRAV8-6A0A0B4J262 113 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SMR3BP02814 79 aaPredicted RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 OR10J4P0C629 311 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 RANP62826 216 aaKnown RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FLI1Q01543 452 aaPredicted RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TMEM183BQ1AE95 376 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LINC01620Q4KN68 170 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 OR10J3Q5JRS4 329 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SH2D6Q7Z4S9 175 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TMEM183AQ8IXX5 376 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LYPD1Q8N2G4 141 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SCGB1C1Q8TD33 95 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SGK494Q96LW2 274 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 VGLL1Q99990 258 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LINC00467Q9BRT7 94 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PAXXQ9BUH6 204 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MRPL32Q9BYC8 188 aaKnown RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NMES1Q9C002 83 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms