RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SLC50A1Q9BRV3 221 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HIGD2AQ9BW72 106 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DPY30Q9C005 99 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 AGPAT4-IT1Q9H0P7 198 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q9H521 79 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 BCL2L10Q9HD36 194 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PSORS1C2Q9UIG4 136 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HHLA3Q9XRX5 114 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LSM2Q9Y333 95 aaKnown RBP0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TPRKBQ9Y3C4 175 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 AP4S1Q9Y587 144 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SERP1Q9Y6X1 66 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LY96Q9Y6Y9 160 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CCDC141Q6ZP82 1450 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MAGI2Q86UL8 1455 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ANK1P16157 1881 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PLXNA4Q9HCM2 1894 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ARHGEF12Q9NZN5 1544 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ARAP2Q8WZ64 1704 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PTPRFP10586 1907 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FREM3P0C091 2139 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 BRWD1Q9NSI6 2320 aa0.58□□□□□ -2.32
SCARNA16.2-201ENST00000516520 RGPD3A6NKT7 1758 aaPredicted RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 EML5Q05BV3 1969 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CASP8AP2Q9UKL3 1982 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 BAZ2BQ9UIF8 2168 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CHD3Q12873 2000 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LTBP2Q14767 1821 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PARP14Q460N5 1801 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CC2D2AQ9P2K1 1620 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TANC1Q9C0D5 1861 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ROBO1Q9Y6N7 1651 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 A0A087WSZ3 146 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UQCRHLA0A096LP55 91 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 TRAV14DV4A0A0A6YYC5 116 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IGHV1-18A0A0C4DH31 117 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MUC21A0A0G2JKD1 596 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C11orf86A6NJI1 115 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 A6NN06 94 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF736B4DX44 427 aaPredicted RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MCRIP1C9JLW8 97 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 J3QLW9 94 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SSSCA1O60232 199 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SNRNP200O75643 2136 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PROSCO94903 275 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MPC2O95563 127 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SHBGP04278 402 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 UQCRHP07919 91 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SLC25A4P12235 298 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PIPP12273 146 aaPredicted RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MIFP14174 115 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PEBP1P30086 187 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CKS2P33552 79 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DSCR4P56555 118 aaPredicted RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ROMO1P60602 79 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 S100A10P60903 97 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NPC2P61916 151 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 BLCAPP62952 87 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FOXF1Q12946 379 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CATR1Q13166 79 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CIRBPQ14011 172 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SS18Q15532 418 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 IQCJQ1A5X6 159 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FAM229BQ4G0N7 80 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CLLU1Q5K131 121 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C6orf52Q5T4I8 152 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 C9orf153Q5TBE3 101 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 FAM27BQ5VT28 67 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MIC13Q5XKP0 118 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OR2T2Q6IF00 324 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q6ZS92 163 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ARPINQ7Z6K5 226 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SLC35E3Q7Z769 313 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MED12LQ86YW9 2145 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 Q8N814 137 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LINC00301Q8NCQ3 95 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OR4X2Q8NGF9 303 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OR2T35Q8NGX2 323 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 OTOSQ8NHW6 89 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 VSTM2AQ8TAG5 236 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 POP5Q969H6 163 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SPTSSAQ969W0 71 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CHCHD1Q96BP2 118 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MUCL1Q96DR8 90 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 ZC2HC1AQ96GY0 325 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NAA38Q9BRA0 125 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 HSPE1-MOB4S4R3N1 261 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LRRIQ1Q96JM4 1722 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 SHANK3Q9BYB0 1731 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PEAK1Q9H792 1746 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 NWD2Q9ULI1 1742 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MARF1Q9Y4F3 1742 aaKnown RBP0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 DNMBPQ6XZF7 1577 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 LAMC3Q9Y6N6 1575 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PATJQ8NI35 1801 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 CUL9Q8IWT3 2517 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MYOFQ9NZM1 2061 aa0.57□□□□□ -2.32
SCARNA16.2-201ENST00000516520 PTPN23Q9H3S7 1636 aa0.56□□□□□ -2.32
SCARNA16.2-201ENST00000516520 MAP3K4Q9Y6R4 1608 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms