RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 CDC42EP2O14613 210 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 PYYP10082 97 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 SDC4P31431 198 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 PPP1R2P41236 205 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 GTF2A1P52655 376 aaPredicted RBP-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 CROCCP2Q86T23 111 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 OR5H6Q8NGV6 325 aa-0.96□□□□□ -2.56
SNORA40.9-201ENST00000515895 SPTA1P02549 2419 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 TRAV12-2A0A075B6T6 113 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 TEX49A0A1B0GTD5 131 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 EDF1O60869 148 aaKnown RBP-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 MAXP61244 160 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 DEFB109BQ30KR1 87 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 OR5A2Q8NGI9 324 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 PRELID3AQ96N28 172 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 CYP4F30PQ9H0H9 118 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 LRTM1Q9HBL6 345 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 FKBP11Q9NYL4 201 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 BET1LQ9NYM9 111 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 CSPG4Q6UVK1 2322 aa-0.97□□□□□ -2.56
SNORA40.9-201ENST00000515895 CREBBPQ92793 2442 aa-0.97□□□□□ -2.57
SNORA40.9-201ENST00000515895 LOC107986453A0A1B0GWG9 222 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 ATG12O94817 140 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 IFNA6P05013 189 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 FABP2P12104 132 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 ELOF1P60002 83 aaKnown RBP-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 SMIM11BQ8TCY0 68 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 AP3S1Q92572 193 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 BORCS8Q96FH0 119 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 CARD19Q96LW7 228 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 SMIM7Q9BQ49 75 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 HELZP42694 1942 aaKnown RBP-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRAPPC8Q9Y2L5 1435 aa-0.98□□□□□ -2.57
SNORA40.9-201ENST00000515895 ATRQ13535 2644 aa-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 APODP05090 189 aa-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 WFDC2Q14508 124 aa-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 UNQ5815/PRO19632Q6UWF5 114 aa-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 DGCR14Q96DF8 476 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 LAMTOR3Q9UHA4 124 aa-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 VIRMAQ69YN4 1812 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.9-201ENST00000515895 NHSL1Q5SYE7 1610 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 PLCE1Q9P212 2302 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRAV17A0A0B4J275 112 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRBV10-1A0A0K0K1A3 114 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 CSN2P05814 226 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 CTXN2P0C2S0 81 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 LTC4SQ16873 150 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 SS18L2Q9UHA2 77 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 DLC1Q96QB1 1528 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 GVINP1Q7Z2Y8 2422 aa-1□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 ZNF670-ZNF695F2Z2N8 137 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 APOC1P02654 83 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 SLC25A4P12235 298 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 ARF6P62330 175 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 RPL19P84098 196 aaKnown RBP-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 NUBP2Q9Y5Y2 271 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 CHD8Q9HCK8 2581 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 SSC5DA1L4H1 1573 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 MYH2Q9UKX2 1941 aa-1.01□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRBV27A0A0K0K1C4 114 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 M0R3E3 92 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 OR2H2O95918 312 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 SDC2P34741 201 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 BLCAPP62952 87 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 ADGBQ8N7X0 1667 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 OR13C6PQ8NH95 151 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 GINS3Q9BRX5 216 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 PARVGQ9HBI0 331 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 TMEM242Q9NWH2 141 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 LRP1BQ9NZR2 4599 aa-1.02□□□□□ -2.57
SNORA40.9-201ENST00000515895 FAT2Q9NYQ8 4349 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 TRDV1A0A1B0GX56 115 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 RBAKDNA6NC62 111 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 MFSD11O43934 449 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 IFNA21P01568 189 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 POLR2JP52435 117 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 REEP5Q00765 189 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 SPAG11BQ08648 103 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 DHRS4L2Q6PKH6 230 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 MED11Q9P086 117 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 EP300Q09472 2414 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 TGP01266 2768 aa-1.03□□□□□ -2.57
SNORA40.9-201ENST00000515895 LAMB1P07942 1786 aa-1.03□□□□□ -2.58
SNORA40.9-201ENST00000515895 BIVM-ERCC5R4GMW8 1640 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 TCOF1Q13428 1488 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 A0A087WTM6 91 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 TMEM210A6NLX4 147 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 ZNF815PA8K554 130 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 GABARAPH6UMI1 98 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 IFNA1P01562 189 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 S100A6P06703 90 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 COX4I1P13073 169 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 SPRR2BP35325 72 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 TAS2R41P59536 307 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 Q5VSD8 79 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 SSBP3-AS1Q7Z2R9 100 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 MORN4Q8NDC4 146 aa-1.04□□□□□ -2.58
SNORA40.9-201ENST00000515895 CEP19Q96LK0 163 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms