RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 PAIP2BQ9ULR5 123 aaKnown RBP0.7□□□□□ -2.3
PHF3-211ENST00000514822 HIGD1AQ9Y241 93 aa0.7□□□□□ -2.3
PHF3-211ENST00000514822 RYR3Q15413 4870 aa0.7□□□□□ -2.3
PHF3-211ENST00000514822 CASP8AP2Q9UKL3 1982 aa0.7□□□□□ -2.3
PHF3-211ENST00000514822 NINQ8N4C6 2090 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 ASH1LQ9NR48 2969 aaKnown RBP0.69□□□□□ -2.3
PHF3-211ENST00000514822 ABCA12Q86UK0 2595 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 TCOF1Q13428 1488 aaKnown RBP0.69□□□□□ -2.3
PHF3-211ENST00000514822 ARAP1Q96P48 1450 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 CCDC168Q8NDH2 2452 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 M0QZK8 103 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 APOC1P02654 83 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 HLA-DRB4P13762 266 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 EVI2AP22794 236 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 EFNA4P52798 201 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 FXYD4P59646 89 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 NCS1P62166 190 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 SNRPD3P62318 126 aaKnown RBP0.69□□□□□ -2.3
PHF3-211ENST00000514822 TMEM244Q5VVB8 128 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 TMEM91Q6ZNR0 172 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 TET1Q8NFU7 2136 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 PPDPFLQ8WWR9 84 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 SAR1AQ9NR31 198 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 TAS2R8Q9NYW2 309 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 HLA-DRB4X5D2U9 266 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 MDN1Q9NU22 5596 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 EPPK1P58107 5090 aaKnown RBP0.69□□□□□ -2.3
PHF3-211ENST00000514822 KALRNO60229 2985 aa0.69□□□□□ -2.3
PHF3-211ENST00000514822 DSPPQ9NZW4 1301 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 SPAG17Q6Q759 2223 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 A0A0G2JMM0 328 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 TMEM30CPA0ZSE6 113 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 ZNF727A8MUV8 499 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 HIGD1CA8MV81 97 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 TCRAP04437 139 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 SLC25A5P05141 298 aaKnown RBP0.68□□□□□ -2.3
PHF3-211ENST00000514822 SMCO1Q147U7 214 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 FRMPD1Q5SYB0 1578 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 C10orf99Q6UWK7 81 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 Q6ZS92 163 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 NUP210Q8TEM1 1887 aaPredicted RBP0.68□□□□□ -2.3
PHF3-211ENST00000514822 MAFIPQ8WZ33 124 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 DMAC1Q96GE9 116 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 NIT2Q9NQR4 276 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 FKBP11Q9NYL4 201 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 MRPL35Q9NZE8 188 aaKnown RBP0.68□□□□□ -2.3
PHF3-211ENST00000514822 UNC13AQ9UPW8 1703 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 SPTBN4Q9H254 2564 aa0.68□□□□□ -2.3
PHF3-211ENST00000514822 CNTRLQ7Z7A1 2325 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 FAM135BQ49AJ0 1406 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ERBINQ96RT1 1412 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 CDC42EP2O14613 210 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 TPST1O60507 370 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 NCR2O95944 276 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 IGF2P01344 180 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 KDELR1P24390 212 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 AKR1D1P51857 326 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 POLR2JP52435 117 aaKnown RBP0.67□□□□□ -2.3
PHF3-211ENST00000514822 CAV3P56539 151 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 CKS1BP61024 79 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 XAF1Q6GPH4 301 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 UNQ5815/PRO19632Q6UWF5 114 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ATP11AUNQ6ZP68 121 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ZCCHC23Q6ZST2 131 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 NDUFA11Q86Y39 141 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 SBSPONQ8IVN8 264 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 OTOSQ8NHW6 89 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 SLC35B3Q9H1N7 401 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ATG5Q9H1Y0 275 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 MRPL36Q9P0J6 103 aaKnown RBP0.67□□□□□ -2.3
PHF3-211ENST00000514822 PTPRFP10586 1907 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 MUC4Q99102 2169 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ABCA13Q86UQ4 5058 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 NSD1Q96L73 2696 aaPredicted RBP0.67□□□□□ -2.3
PHF3-211ENST00000514822 MGAMO43451 1857 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 UHRF1BP1LA0JNW5 1464 aa0.67□□□□□ -2.3
PHF3-211ENST00000514822 ZFC3H1O60293 1989 aaKnown RBP0.66□□□□□ -2.3
PHF3-211ENST00000514822 SSPOA2VEC9 5147 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 DISP2A7MBM2 1401 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 FGD6Q6ZV73 1430 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 FLNAP21333 2647 aaKnown RBP0.66□□□□□ -2.3
PHF3-211ENST00000514822 CCDC179H3BU77 68 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 M0R2Z0 102 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 ADCYAP1P18509 176 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 SPINK13Q1W4C9 94 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 SPINK9Q5DT21 86 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 LYPD5Q6UWN5 251 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 BANF2Q9H503 90 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 COPZ2Q9P299 210 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 NUP210LQ5VU65 1888 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 PLXNA4Q9HCM2 1894 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 TANC2Q9HCD6 1990 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 ALPK3Q96L96 1907 aa0.66□□□□□ -2.3
PHF3-211ENST00000514822 NAV3Q8IVL0 2385 aa0.65□□□□□ -2.3
PHF3-211ENST00000514822 OVOS2A0A0J9YW53 1432 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms