RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 NF1P21359 2839 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 HSBP1O75506 76 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 LY6G6DO95868 133 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 CSN3P07498 182 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 FHL3Q13643 280 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
VCAN-211ENST00000513984 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
VCAN-211ENST00000513984 MSRB1Q9NZV6 116 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 SORL1Q92673 2214 aa11.17□□□□□ -0.62
VCAN-211ENST00000513984 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 CD28P10747 220 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
VCAN-211ENST00000513984 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 MRPL51Q4U2R6 128 aaKnown RBP11.16□□□□□ -0.62
VCAN-211ENST00000513984 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 NDUFA7O95182 113 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
VCAN-211ENST00000513984 D6R8Y8 96 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 MED14OSP0DP75 135 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 CD33P20138 364 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 LEPP41159 167 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 CACNG7P62955 275 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 ANXA2RQ3ZCQ2 193 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 EBLN2Q6P2I7 272 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 RNF114Q9Y508 228 aa11.15□□□□□ -0.62
VCAN-211ENST00000513984 H3BVH4 76 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 LINC00614P0C842 121 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 TSSC4Q9Y5U2 329 aaPredicted RBP11.14□□□□□ -0.63
VCAN-211ENST00000513984 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
VCAN-211ENST00000513984 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 TMEM61Q8N0U2 210 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 C11orf44Q8N8P7 122 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
VCAN-211ENST00000513984 CITED2Q99967 270 aaPredicted RBP11.14□□□□□ -0.63
VCAN-211ENST00000513984 M0R2Z0 102 aa11.13□□□□□ -0.63
VCAN-211ENST00000513984 CCL24O00175 119 aa11.13□□□□□ -0.63
VCAN-211ENST00000513984 RAB4AP20338 218 aa11.13□□□□□ -0.63
VCAN-211ENST00000513984 ASIPP42127 132 aa11.13□□□□□ -0.63
VCAN-211ENST00000513984 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
VCAN-211ENST00000513984 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 C7orf71A4D174 169 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 DEFB114Q30KQ6 69 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 OTOGQ6ZRI0 2925 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 IGHV1-24A0A0C4DH33 117 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 PPBPP02775 128 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 CKS2P33552 79 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 MUC4Q99102 2169 aa11.12□□□□□ -0.63
VCAN-211ENST00000513984 NOTCH2Q04721 2471 aa11.11□□□□□ -0.63
VCAN-211ENST00000513984 A8MTW9 85 aa11.11□□□□□ -0.63
VCAN-211ENST00000513984 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
VCAN-211ENST00000513984 TSPOP30536 169 aa11.11□□□□□ -0.63
VCAN-211ENST00000513984 KRTDAPP60985 99 aa11.11□□□□□ -0.63
VCAN-211ENST00000513984 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
VCAN-211ENST00000513984 C3orf79P0CE67 100 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 RNASE3P12724 160 aaKnown RBP11.1□□□□□ -0.63
VCAN-211ENST00000513984 CDKN1BP46527 198 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 PROK1P58294 105 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 PKIAP61925 76 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 TDRG1Q3Y452 100 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 Q8N976 141 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
VCAN-211ENST00000513984 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 NPYP01303 97 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 EVI2AP22794 236 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 DEFB131AP59861 70 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
VCAN-211ENST00000513984 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 GNRH2O43555 120 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 NCR2O95944 276 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 PMCHL1Q16048 86 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
VCAN-211ENST00000513984 FA2HQ7L5A8 372 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
VCAN-211ENST00000513984 TCF21O43680 179 aa11.08□□□□□ -0.64
VCAN-211ENST00000513984 NXPH4O95158 308 aa11.08□□□□□ -0.64
VCAN-211ENST00000513984 IFI27P40305 119 aaPredicted RBP11.08□□□□□ -0.64
VCAN-211ENST00000513984 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
VCAN-211ENST00000513984 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms