RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 PRR9Q5T870 116 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 LYPD5Q6UWN5 251 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 Q6ZQT7 251 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 GOLT1AQ6ZVE7 132 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 NFE4Q86UQ8 179 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 OR4C5Q8NGB2 326 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 OR2G3Q8NGZ4 309 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 PCNPQ8WW12 178 aaKnown RBP5.03□□□□□ -1.6
HTT-212ENST00000513639 C8orf49Q96NF6 230 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 NDFIP1Q9BT67 221 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
HTT-212ENST00000513639 MRPL16Q9NX20 251 aaKnown RBP5.03□□□□□ -1.6
HTT-212ENST00000513639 TNFSF18Q9UNG2 199 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 ALG5Q9Y673 324 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
HTT-212ENST00000513639 BORCS7-ASMTA0A0B4J1R7 106 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 TAAR5O14804 337 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 CXorf1O96002 111 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 IGHV3-53P01767 116 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 STAG3L2P0CL84 134 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 STAG3L3P0CL85 134 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 SRIP30626 198 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 CDC34P49427 236 aaPredicted RBP5.02□□□□□ -1.61
HTT-212ENST00000513639 SAPCD1Q5SSQ6 148 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 C5orf17Q8NAS9 161 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 SUN5Q8TC36 379 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 AQP10Q96PS8 301 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 TXNDC17Q9BRA2 123 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
HTT-212ENST00000513639 ACTR3CQ9C0K3 210 aaPredicted RBP5.02□□□□□ -1.61
HTT-212ENST00000513639 SDF2L1Q9HCN8 221 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 TMEM167BQ9NRX6 74 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 NAGKQ9UJ70 344 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 RPH3ALQ9UNE2 315 aa5.02□□□□□ -1.61
HTT-212ENST00000513639 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 TRAV4A0A0B4J268 109 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 C9JCJ5 164 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 HMGB3O15347 200 aaKnown RBP5.01□□□□□ -1.61
HTT-212ENST00000513639 GNRH2O43555 120 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 NXPH4O95158 308 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 PFN1P07737 140 aaKnown RBP5.01□□□□□ -1.61
HTT-212ENST00000513639 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
HTT-212ENST00000513639 ARL14EPLP0DKL9 152 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 EVI2AP22794 236 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 ATP6V0CP27449 155 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 RAB2AP61019 212 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 C21orf62-AS1Q17RA5 79 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 ZFP69Q49AA0 526 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 SPATA12Q7Z6I5 190 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 HSD17B11Q8NBQ5 300 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 SH3BGRL3Q9H299 93 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 EPDR1Q9UM22 224 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
HTT-212ENST00000513639 hCG_2014768A0A024R1R8 64 aa5□□□□□ -1.61
HTT-212ENST00000513639 IGHV3-16A0A0C4DH30 117 aa5□□□□□ -1.61
HTT-212ENST00000513639 A0A1W2PRE2 83 aa5□□□□□ -1.61
HTT-212ENST00000513639 K7EQD1 137 aa5□□□□□ -1.61
HTT-212ENST00000513639 TCRAP04437 139 aa5□□□□□ -1.61
HTT-212ENST00000513639 GYPEP15421 78 aa5□□□□□ -1.61
HTT-212ENST00000513639 GCHFRP30047 84 aa5□□□□□ -1.61
HTT-212ENST00000513639 PPT1P50897 306 aa5□□□□□ -1.61
HTT-212ENST00000513639 ZNF876PQ49A33 203 aa5□□□□□ -1.61
HTT-212ENST00000513639 SMUG1Q53HV7 270 aa5□□□□□ -1.61
HTT-212ENST00000513639 ZNF479Q96JC4 524 aa5□□□□□ -1.61
HTT-212ENST00000513639 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
HTT-212ENST00000513639 PSG8Q9UQ74 426 aa5□□□□□ -1.61
HTT-212ENST00000513639 TRAV8-1A0A0A6YYK1 113 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 EIF3GO75821 320 aaKnown RBP eCLIP4.99□□□□□ -1.61
HTT-212ENST00000513639 GCGP01275 180 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 IFNA7P01567 189 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 SFTA3P0C7M3 94 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 TIRAPP58753 221 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 LINC00315P59091 139 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 C10orf126Q8N4M7 172 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 CYB561D1Q8N8Q1 229 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 PTH2Q96A98 100 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 TVP23CQ96ET8 276 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
HTT-212ENST00000513639 TRAV8-6A0A0B4J262 113 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 TRBV6-4A0A1B0GX49 114 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 FABP5P3A8MUU1 101 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 F6UZH7 168 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 TYMSP04818 313 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 GATA1P15976 413 aaPredicted RBP4.98□□□□□ -1.61
HTT-212ENST00000513639 ERVFC1-1P60608 527 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 GNG5P63218 68 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 FLI1Q01543 452 aaPredicted RBP4.98□□□□□ -1.61
HTT-212ENST00000513639 PIK3CD-AS1Q5SR53 167 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 PRNTQ86SH4 94 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 TMEM75Q8N9X5 138 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 NHLRC2Q8NBF2 726 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 OR2T35Q8NGX2 323 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 HIST1H2BAQ96A08 127 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 SGK494Q96LW2 274 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 MSRB1Q9NZV6 116 aa4.98□□□□□ -1.61
HTT-212ENST00000513639 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms