RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 EVI2AP22794 236 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 CKS2P33552 79 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 SPINT3P49223 89 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 ZNF137PP52743 207 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 QRFPP83859 136 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 DR1Q01658 176 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 RHOHQ15669 191 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 SPINK13Q1W4C9 94 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 IDO2Q6ZQW0 420 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 OR8I2Q8N0Y5 310 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 OTOSQ8NHW6 89 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 MRPL40Q9NQ50 206 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 MRPL36Q9P0J6 103 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 OVOS2A0A0G2JMS6 1433 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 F5P12259 2224 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 IGF2RP11717 2491 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 TRPM7Q96QT4 1865 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 XIRP1Q702N8 1843 aaKnown RBP0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 CTTNBP2Q8WZ74 1663 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 ARAP1Q96P48 1450 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 IGHV1-24A0A0C4DH33 117 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 A0A0G2JMM0 328 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 NBDYA0A0U1RRE5 68 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 HIGD1CA8MV81 97 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 DEGS1O15121 323 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 HIST1H1BP16401 226 aaKnown RBP0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 PCBD1P61457 104 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 OR8B8Q15620 311 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 HSD17B12Q53GQ0 312 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 C6orf52Q5T4I8 152 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 Q5XG85 94 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 LYPD5Q6UWN5 251 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 TCTE3Q8IZS6 198 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 OR4S1Q8NGB4 309 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 MAGOHBQ96A72 148 aaKnown RBP0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 DMAC1Q96GE9 116 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 COMMD3Q9UBI1 195 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 METTL1Q9UBP6 276 aaKnown RBP0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
TRAPPC11-210ENST00000513600 PTPRGP23470 1445 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 LOC101927531A0A1B0GV80 90 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 CDC42EP2O14613 210 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 TPST1O60507 370 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 TNFSF15O95150 251 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 TCRAP04437 139 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 DBIP07108 87 aaKnown RBP0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 PAEPP09466 180 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 ADCYAP1P18509 176 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 SDC4P31431 198 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 SPINK7P58062 85 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 PLGLB1Q02325 96 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 FXYD3Q14802 87 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 CCDC153Q494R4 210 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 GLYATL3Q5SZD4 288 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 TMEM91Q6ZNR0 172 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 C5orf56Q8N8D9 126 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 LINC00208Q96KT6 92 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 ATG5Q9H1Y0 275 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 PLAC8Q9NZF1 115 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 HELZP42694 1942 aaKnown RBP0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 TTC28Q96AY4 2481 aa0.24□□□□□ -2.37
TRAPPC11-210ENST00000513600 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 ARHGAP31Q2M1Z3 1444 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 TRAV2A0A0B4J234 112 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 C9JAW5 83 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 SMIM24O75264 130 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 IGKCP01834 107 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 MT-ND4LP03901 98 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 CD3DP04234 171 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 SCGB1A1P11684 91 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 IL7P13232 177 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 HLA-DRB4P13762 266 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 KDELR1P24390 212 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 CMPK1P30085 196 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 POLR2JP52435 117 aaKnown RBP0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 RPL37P61927 97 aaKnown RBP0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 MORN2Q502X0 79 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 TMEM244Q5VVB8 128 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 AKAP14Q86UN6 197 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 PYDC1Q8WXC3 89 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 AIF1LQ9BQI0 150 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 FAM103A1Q9BTL3 118 aaKnown RBP0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 TAS2R8Q9NYW2 309 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 CALML5Q9NZT1 146 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 HIGD1AQ9Y241 93 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 DNAJC15Q9Y5T4 150 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 HLA-DRB4X5D2U9 266 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 TNCP24821 2201 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 WDR97A6NE52 1622 aa0.23□□□□□ -2.37
TRAPPC11-210ENST00000513600 ANKRD30AQ9BXX3 1397 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 TRBV10-1A0A0K0K1A3 114 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 A0A1B0GW64 132 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 YPEL1O60688 119 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 LY6G6CO95867 125 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 OR2H2O95918 312 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 CCKP06307 115 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms