RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 TMEM189A5PLL7 270 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 B4DEV8 164 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
NME1-210ENST00000512768 HTN1P15515 57 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
NME1-210ENST00000512768 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 C15orf54Q8N8G6 183 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 OR2D3Q8NGH3 330 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 OR10G8Q8NGN5 311 aa13.01□□□□□ -0.33
NME1-210ENST00000512768 CBY3A6NI87 242 aa13□□□□□ -0.33
NME1-210ENST00000512768 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
NME1-210ENST00000512768 SPRY2O43597 315 aa13□□□□□ -0.33
NME1-210ENST00000512768 PRM2P04554 102 aa13□□□□□ -0.33
NME1-210ENST00000512768 SVBPQ8N300 66 aa13□□□□□ -0.33
NME1-210ENST00000512768 CLRN3Q8NCR9 226 aa13□□□□□ -0.33
NME1-210ENST00000512768 KCNS1Q96KK3 526 aa13□□□□□ -0.33
NME1-210ENST00000512768 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
NME1-210ENST00000512768 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
NME1-210ENST00000512768 RETNQ9HD89 108 aa13□□□□□ -0.33
NME1-210ENST00000512768 MT-ND4LP03901 98 aa12.99□□□□□ -0.33
NME1-210ENST00000512768 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
NME1-210ENST00000512768 TP53TG3Q9ULZ0 132 aa12.99□□□□□ -0.33
NME1-210ENST00000512768 TP53TG1Q9Y2A0 90 aa12.99□□□□□ -0.33
NME1-210ENST00000512768 GRIFINA4D1Z8 144 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 GNRH2O43555 120 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 RPS20P60866 119 aaKnown RBP12.98□□□□□ -0.33
NME1-210ENST00000512768 RNF212Q495C1 297 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 X6R8D5 127 aa12.98□□□□□ -0.33
NME1-210ENST00000512768 TRGV11A0A075B6L2 103 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 PPP1R2P9O14990 202 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 SNAPINO95295 136 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 TYMSP04818 313 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 GZMBP10144 247 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 AZU1P20160 251 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 B9D2Q9BPU9 175 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 V9GYV3 84 aa12.97□□□□□ -0.33
NME1-210ENST00000512768 XKRY2A2RUG3 117 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 C7orf77A4D0Y5 90 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 ANAPC16Q96DE5 110 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 NEU1Q99519 415 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 SPATA25Q9BR10 227 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.33
NME1-210ENST00000512768 IGHV3-16A0A0C4DH30 117 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 CXCL1P09341 107 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 ASIPP42127 132 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 RHEBQ15382 184 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 CT83Q5H943 113 aa12.95□□□□□ -0.34
NME1-210ENST00000512768 A8MWL6 223 aa12.94□□□□□ -0.34
NME1-210ENST00000512768 S100A4P26447 101 aaKnown RBP12.94□□□□□ -0.34
NME1-210ENST00000512768 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
NME1-210ENST00000512768 RPS10P5Q9NQ39 176 aa12.94□□□□□ -0.34
NME1-210ENST00000512768 MDFICQ9P1T7 246 aa12.94□□□□□ -0.34
NME1-210ENST00000512768 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
NME1-210ENST00000512768 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 DNLZQ5SXM8 178 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 ZNF493Q6ZR52 646 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
NME1-210ENST00000512768 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 CTDSP1Q9GZU7 261 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 DNAH9Q9NYC9 4486 aa12.93□□□□□ -0.34
NME1-210ENST00000512768 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 H3BVH4 76 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 MIFP14174 115 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 S100A1P23297 94 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 GSN-AS1Q9NRJ2 163 aa12.92□□□□□ -0.34
NME1-210ENST00000512768 PRKDCP78527 4128 aaKnown RBP12.91□□□□□ -0.34
NME1-210ENST00000512768 A0A087WWC5 75 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
NME1-210ENST00000512768 TCL1AP56279 114 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 FER1L6-AS1Q8NA97 138 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 Q8NAQ8 132 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 TENM3Q9P273 2699 aa12.91□□□□□ -0.34
NME1-210ENST00000512768 IGLC6P0CF74 106 aa12.9□□□□□ -0.34
NME1-210ENST00000512768 EMP1P54849 157 aa12.9□□□□□ -0.34
NME1-210ENST00000512768 C9orf85Q96MD7 179 aa12.9□□□□□ -0.34
NME1-210ENST00000512768 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.34
NME1-210ENST00000512768 IL36BQ9NZH7 164 aa12.9□□□□□ -0.34
NME1-210ENST00000512768 HUWE1Q7Z6Z7 4374 aaKnown RBP12.89□□□□□ -0.35
NME1-210ENST00000512768 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 DEFB4AO15263 64 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
NME1-210ENST00000512768 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 HIGD1CA8MV81 97 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 LYZL1Q6UWQ5 148 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms