RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CST11Q9H112 138 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 PPRC1Q5VV67 1664 aaKnown RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 ATG2AQ2TAZ0 1938 aa-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 CDK12Q9NYV4 1490 aaPredicted RBP-0.35□□□□□ -2.47
PDGFC-208ENST00000512711 F5P12259 2224 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 SMARCA2P51531 1590 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 PIK3C2GO75747 1445 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 M0R2T5 61 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 IGHV3-30P01768 117 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 MT1EP04732 61 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 IFNA4P05014 189 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 CRHP06850 196 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 RPS17P08708 135 aaKnown RBP-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 IGHV3-30-5P0DP03 117 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 PHBP35232 272 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 HIST1H3AP68431 136 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 EDDM3AQ14507 147 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 TAF1AQ15573 450 aaPredicted RBP-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 MSMO1Q15800 293 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 HACD4Q5VWC8 232 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 CSAG1Q6PB30 78 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 C5orf56Q8N8D9 126 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 SIGMAR1Q99720 223 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 PRR15LQ9BU68 103 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 BIN3Q9NQY0 253 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 TRPM7Q96QT4 1865 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 TANC1Q9C0D5 1861 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 LAMC1P11047 1609 aa-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 MAP2P11137 1827 aaKnown RBP-0.36□□□□□ -2.47
PDGFC-208ENST00000512711 LAMB1P07942 1786 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 NBDYA0A0U1RRE5 68 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 C3orf85A0A1B0GTC6 90 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 SMIM23A6NLE4 172 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 BBIP1A8MTZ0 92 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 M0QX08 132 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 ATP5HO75947 161 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 RPP14O95059 124 aaKnown RBP-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 TCRBP04435 133 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 GYPBP06028 91 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 SNCBQ16143 134 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 TMEM97Q5BJF2 176 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 C3orf62Q6ZUJ4 267 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 FAM216BQ8N7L0 139 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 BTF3L4Q96K17 158 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 PARVBQ9HBI1 364 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 TMEM14BQ9NUH8 114 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 FAM32AQ9Y421 112 aaKnown RBP-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 AFDNP55196 1824 aaKnown RBP-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 CTTNBP2Q8WZ74 1663 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 N4BP2Q86UW6 1770 aaPredicted RBP-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 NUP210LQ5VU65 1888 aa-0.37□□□□□ -2.47
PDGFC-208ENST00000512711 CCDC144AA2RUR9 1427 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 ZNF609O15014 1411 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 USF3Q68DE3 2245 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 CETN3O15182 167 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 HIST1H2BKO60814 126 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 PIAS1O75925 651 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 MT-ND6P03923 174 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 PRM1P04553 51 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 HIST1H2BJP06899 126 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 MPC1LP0DKB6 136 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 INSL3P51460 131 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 COTL1Q14019 142 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 IQCJQ1A5X6 159 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 LINC00269Q8N2A0 174 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 MT1LQ93083 61 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 OR4C12Q96R67 309 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 EFCAB11Q9BUY7 163 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 NMNAT1Q9HAN9 279 aaPredicted RBP-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 MRPL36Q9P0J6 103 aaKnown RBP-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 TPRKBQ9Y3C4 175 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 MAP3K5Q99683 1374 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 COL4A6Q14031 1691 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 ADGRL3Q9HAR2 1447 aa-0.38□□□□□ -2.47
PDGFC-208ENST00000512711 ANK1P16157 1881 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 KDM5AP29375 1690 aaKnown RBP-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 A0A096LNT2 108 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 A0A1W2PPB8 328 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 HIGD1CA8MV81 97 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 KIR3DP1A8MWS1 328 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 C5orf58C9J3I9 102 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 F2Z2F3 143 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 K7EQZ3 153 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 TNFP01375 233 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 IFNA14P01570 189 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 CEBPGP53567 150 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 NCALDP61601 193 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 POU6F1Q14863 301 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 SPA17Q15506 151 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 KRTAP19-2Q3LHN2 52 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 LIN52Q52LA3 116 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 OR8J2Q8NGG1 315 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 OR10X1Q8NGY0 326 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 OR5AK2Q8NH90 309 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 ISOC1Q96CN7 298 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 DSCR8Q96T75 97 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 OR2J1Q9GZK6 312 aa-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 MRPL35Q9NZE8 188 aaKnown RBP-0.39□□□□□ -2.47
PDGFC-208ENST00000512711 COMMD3Q9UBI1 195 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms