RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 TCEAL7Q9BRU2 100 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 CSTL1Q9H114 145 aa5.89□□□□□ -1.47
SMAD1-209ENST00000511125 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
SMAD1-209ENST00000511125 TRAV21A0A0B4J279 112 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 CXCL1P09341 107 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 TSPOP30536 169 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 LEPP41159 167 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 GSN-AS1Q9NRJ2 163 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 LOC102724200A0A096LPH7 203 aaPredicted RBP5.88□□□□□ -1.47
SMAD1-209ENST00000511125 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 C19orf71A6NCJ1 209 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 SAMD5Q5TGI4 173 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 LYZL1Q6UWQ5 148 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 C1orf158Q8N1D5 194 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 OR2K2Q8NGT1 345 aa5.88□□□□□ -1.47
SMAD1-209ENST00000511125 SSBP4Q9BWG4 385 aaPredicted RBP5.88□□□□□ -1.47
SMAD1-209ENST00000511125 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 JPT2Q9H910 190 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 KLLNB2CW77 178 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 ZNF324O75467 553 aaPredicted RBP5.87□□□□□ -1.47
SMAD1-209ENST00000511125 ARMS2P0C7Q2 107 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 RHEBQ15382 184 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 INSP01308 110 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 TYMSP04818 313 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 NUP35Q8NFH5 326 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 OR10AG1Q8NH19 301 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 IMMP2LQ96T52 175 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 OSTCQ9NRP0 149 aa5.87□□□□□ -1.47
SMAD1-209ENST00000511125 K7EIL1 84 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 IGHV3-53P01767 116 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 TWIST1Q15672 202 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 ZNF575Q86XF7 245 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 FRZBQ92765 325 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 FAM19A4Q96LR4 140 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 IGHV1OR15-1A0A075B7D0 117 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 RPS10P46783 165 aaKnown RBP5.86□□□□□ -1.47
SMAD1-209ENST00000511125 DEFA6Q01524 100 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 SMCO4Q9NRQ5 59 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 A8MWL6 223 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 CRISP2P16562 243 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 S100PP25815 95 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 FAM74A4Q5TZK3 123 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 SPANXN1Q5VSR9 72 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 ANAPC16Q96DE5 110 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 MRPL16Q9NX20 251 aaKnown RBP5.86□□□□□ -1.47
SMAD1-209ENST00000511125 IL36BQ9NZH7 164 aa5.86□□□□□ -1.47
SMAD1-209ENST00000511125 A0A087WWL8 130 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 DEFB130BP0DP73 79 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 DEFB130AP0DP74 79 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 NTF3P20783 257 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 ELOBQ15370 118 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 DMRTA1Q5VZB9 504 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 SBSPONQ8IVN8 264 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 ZFP82Q8N141 532 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 FER1L6-AS1Q8NA97 138 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 OR11H2Q8NH07 326 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 NOP10Q9NPE3 64 aaKnown RBP5.85□□□□□ -1.47
SMAD1-209ENST00000511125 PHLDA3Q9Y5J5 127 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 LY96Q9Y6Y9 160 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 CMC4P56277 68 aaPredicted RBP5.85□□□□□ -1.47
SMAD1-209ENST00000511125 TSKUQ8WUA8 353 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 MUC4Q99102 2169 aa5.85□□□□□ -1.47
SMAD1-209ENST00000511125 IGHV3-16A0A0C4DH30 117 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 ASIPP42127 132 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 EGFEM1PQ0D2K5 195 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 KCNIP4Q6PIL6 250 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 ARL6IP6Q8N6S5 226 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 BIN3Q9NQY0 253 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 LENEPQ9Y5L5 61 aa5.84□□□□□ -1.47
SMAD1-209ENST00000511125 TRGV1A0A0A0MS02 117 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 TRBV6-1A0A0K0K1D8 114 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 RNASE3P12724 160 aaKnown RBP5.84□□□□□ -1.48
SMAD1-209ENST00000511125 EVI2AP22794 236 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 Q6AWC8 147 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 C14orf178Q8N769 122 aaPredicted RBP5.84□□□□□ -1.48
SMAD1-209ENST00000511125 FAM210BQ96KR6 192 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 GOLT1BQ9Y3E0 138 aa5.84□□□□□ -1.48
SMAD1-209ENST00000511125 FBLL1A6NHQ2 334 aaKnown RBP5.83□□□□□ -1.48
SMAD1-209ENST00000511125 PPP1R2P9O14990 202 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 HTN3P15516 51 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 RRN3P1Q2M238 152 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 FAM231DQ6ZW35 169 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 RCHY1Q96PM5 261 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 NAT8BQ9UHF3 227 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 TGP01266 2768 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 TRAV26-2A0A0B4J265 109 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 XKRY2A2RUG3 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 GAGE7O76087 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 MGPP08493 103 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 GAGE12FP0CL80 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 GAGE12GP0CL81 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 GAGE12IP0CL82 117 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 LINC01559Q495D7 138 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 ZNF876PQ49A33 203 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 SAMD10Q9BYL1 202 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
SMAD1-209ENST00000511125 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms