RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 KHDC3LQ587J8 217 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 EIF4E3Q8N5X7 224 aaKnown RBP5.98□□□□□ -1.45
PDPN-209ENST00000510906 ZNRF2Q8NHG8 242 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 GNPNAT1Q96EK6 184 aaPredicted RBP5.98□□□□□ -1.45
PDPN-209ENST00000510906 LINC00467Q9BRT7 94 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 TMPRSS5Q9H3S3 457 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 TP53TG3Q9ULZ0 132 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
PDPN-209ENST00000510906 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 HMGB3O15347 200 aaKnown RBP5.97□□□□□ -1.45
PDPN-209ENST00000510906 NMBP08949 121 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 M6PRP20645 277 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 CSN1S1P47710 185 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 CCL18P55774 89 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 TAS2R45P59539 299 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 RAB2AP61019 212 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 ZFP69Q49AA0 526 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 TCTE3Q8IZS6 198 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 LYPD1Q8N2G4 141 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 ZNF680Q8NEM1 530 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 HYLS1Q96M11 299 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 MED28Q9H204 178 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 MSRB1Q9NZV6 116 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 LINC00588Q9Y4M8 146 aa5.97□□□□□ -1.45
PDPN-209ENST00000510906 NACAE9PAV3 2078 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 TRGV2A0A075B6R0 118 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 IGHV1OR15-1A0A075B7D0 117 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 RBAKDNA6NC62 111 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 SPINK4O60575 86 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 TCL1AP56279 114 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
PDPN-209ENST00000510906 Q5BKY6 102 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 C1orf134Q5TEV5 83 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 SSX7Q7RTT5 188 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 HSD17B11Q8NBQ5 300 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 RXFP4Q8TDU9 374 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 OTORQ9NRC9 128 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 RPH3ALQ9UNE2 315 aa5.96□□□□□ -1.46
PDPN-209ENST00000510906 TRBV7-9A0A0J9YWB2 115 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 A0A1W2PPV4 95 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 PGPA6NDG6 321 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 ZNF266Q14584 549 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 MUC21Q5SSG8 566 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
PDPN-209ENST00000510906 PQLC2Q6ZP29 291 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 OR10G4Q8NGN3 311 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 OR10G9Q8NGN4 311 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 OR10G7Q8NGN6 311 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 VSIG2Q96IQ7 327 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 ST6GAL2Q96JF0 529 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 C18orf15Q96N68 181 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 FAM210AQ96ND0 272 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 AQP10Q96PS8 301 aa5.95□□□□□ -1.46
PDPN-209ENST00000510906 MRPL16Q9NX20 251 aaKnown RBP5.95□□□□□ -1.46
PDPN-209ENST00000510906 H3BNG1 76 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 GIPP09681 153 aaPredicted RBP5.94□□□□□ -1.46
PDPN-209ENST00000510906 ARL14EPLP0DKL9 152 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 ATP6V0CP27449 155 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 CDC34P49427 236 aaPredicted RBP5.94□□□□□ -1.46
PDPN-209ENST00000510906 GNG5P63218 68 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 NDUFA5Q16718 116 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 ESRGQ1W209 222 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 SOHLH1Q5JUK2 328 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 GOLT1AQ6ZVE7 132 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 OR2G3Q8NGZ4 309 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 MDFICQ9P1T7 246 aa5.94□□□□□ -1.46
PDPN-209ENST00000510906 A0A096LPF7 62 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 TRAV8-1A0A0A6YYK1 113 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 RNF222A6NCQ9 220 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 C1QBP02746 253 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 STAG3L2P0CL84 134 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 STAG3L3P0CL85 134 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 TMEM183BQ1AE95 376 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 FAM74A1Q5RGS3 127 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 Q6AWC8 147 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 TMEM183AQ8IXX5 376 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 TMED6Q8WW62 240 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 TVP23CQ96ET8 276 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 PSMG3Q9BT73 122 aaPredicted RBP5.93□□□□□ -1.46
PDPN-209ENST00000510906 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 SH3BGRL3Q9H299 93 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 NAGKQ9UJ70 344 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 LENEPQ9Y5L5 61 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 PKD1P98161 4303 aa5.93□□□□□ -1.46
PDPN-209ENST00000510906 HSPG2P98160 4391 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 FXYD6-FXYD2A0A087WZ82 144 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 F6UZH7 168 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 GCHFRP30047 84 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 RPL7L1Q6DKI1 246 aaKnown RBP5.92□□□□□ -1.46
PDPN-209ENST00000510906 FAM159AQ6UWV7 190 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 C6orf223Q8N319 242 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 ASB13Q8WXK3 278 aa5.92□□□□□ -1.46
PDPN-209ENST00000510906 TMEM18Q96B42 140 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms