RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 WFDC2Q14508 124 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 CCL19Q99731 98 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 NPFFR1Q9GZQ6 430 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 PCSK5Q92824 1860 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 SETD2Q9BYW2 2564 aaPredicted RBP11.6□□□□□ -0.55
USP38-202ENST00000510377 A0A087WWL8 130 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 PLNP26678 52 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 CTSGP08311 255 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 AZU1P20160 251 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 DEFB1P60022 68 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 CEND1Q8N111 149 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 DPF1Q92782 380 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 IGKV2D-26A0A0A0MRZ7 120 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 SLC25A16P16260 332 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
USP38-202ENST00000510377 FANCD2OSQ96PS1 177 aa11.58□□□□□ -0.55
USP38-202ENST00000510377 USP9XQ93008 2570 aaPredicted RBP11.58□□□□□ -0.56
USP38-202ENST00000510377 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 CEACAM4O75871 244 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 LINC01549A6NIU2 74 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 ID1P41134 155 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 C12orf74Q32Q52 190 aa11.58□□□□□ -0.56
USP38-202ENST00000510377 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 SIVA1O15304 175 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 F6UB75 175 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 M0R1W7 72 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
USP38-202ENST00000510377 ODF1Q14990 250 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
USP38-202ENST00000510377 WI2-2373I1.2A0A1W2PRP0 233 aa11.56□□□□□ -0.56
USP38-202ENST00000510377 NDUFS8O00217 210 aa11.56□□□□□ -0.56
USP38-202ENST00000510377 DPH3P1Q9H4G8 78 aa11.56□□□□□ -0.56
USP38-202ENST00000510377 FSTL3O95633 263 aa11.56□□□□□ -0.56
USP38-202ENST00000510377 SMIM2Q9BVW6 85 aa11.56□□□□□ -0.56
USP38-202ENST00000510377 RAX2Q96IS3 184 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 FCN3O75636 299 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 RPL39LQ96EH5 51 aaKnown RBP11.55□□□□□ -0.56
USP38-202ENST00000510377 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 HIVEP2P31629 2446 aa11.55□□□□□ -0.56
USP38-202ENST00000510377 F8VRH5 84 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 IGHV7-81A0A0B4J1V7 117 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 CRYGBP07316 175 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 MINOS1Q5TGZ0 78 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 MINOS1-NBL1R4GNA1 71 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 IGLL5B9A064 214 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 SPOCK3Q9BQ16 436 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 PTPRBP23467 1997 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 MYMXA0A1B0GTQ4 84 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
USP38-202ENST00000510377 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
USP38-202ENST00000510377 DLX4Q92988 240 aaPredicted RBP11.54□□□□□ -0.56
USP38-202ENST00000510377 A0A087WX48 190 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 CKS1BP61024 79 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 G3V4G9 280 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 TP53TG1Q9Y2A0 90 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 POLQO75417 2590 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 NPC2P61916 151 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
USP38-202ENST00000510377 GNRH2O43555 120 aa11.52□□□□□ -0.56
USP38-202ENST00000510377 SYT8Q8NBV8 401 aa11.52□□□□□ -0.56
USP38-202ENST00000510377 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
USP38-202ENST00000510377 FGF6P10767 208 aa11.52□□□□□ -0.57
USP38-202ENST00000510377 BUB3O43684 328 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 PPP1R17O96001 155 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 IGF2-ASQ6U949 168 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 A8MWV9 139 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 IGHV3OR16-12A0A075B7B8 117 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 NPFFO15130 113 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
USP38-202ENST00000510377 OVOL3O00110 214 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 OVOL1O14753 267 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 F8W1H4 67 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms