RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 VMA21Q3ZAQ7 101 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 LHFPL1Q86WI0 220 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 LFNGQ8NES3 379 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 LYRM2Q9NU23 88 aaPredicted RBP3.6□□□□□ -1.83
NEK1-204ENST00000509912 ANXA10Q9UJ72 324 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 TRAPPC2LQ9UL33 140 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 TRAV14DV4A0A0A6YYC5 116 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 DUXBA0A1W2PPF3 345 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 B4DEV8 164 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 PPP5D1E7EU14 171 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 FNDC10F2Z333 226 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 TAAR5O14804 337 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 HMGB3O15347 200 aaKnown RBP3.6□□□□□ -1.83
NEK1-204ENST00000509912 SLC25A6P12236 298 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 FXYD4P59646 89 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 SUPT4H1P63272 117 aaKnown RBP3.6□□□□□ -1.83
NEK1-204ENST00000509912 ELOBQ15370 118 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 ZC2HC1AQ96GY0 325 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 PBDC1Q9BVG4 233 aa3.6□□□□□ -1.83
NEK1-204ENST00000509912 ZNF471Q9BX82 626 aaPredicted RBP3.6□□□□□ -1.83
NEK1-204ENST00000509912 KMT2CQ8NEZ4 4911 aaKnown RBP3.59□□□□□ -1.83
NEK1-204ENST00000509912 EPM2AB3EWF7 344 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 SFT2D2O95562 160 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 HRASP01112 189 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 IGLC1P0CG04 106 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 CT45A10P0DMU9 189 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 CASC10Q5T4H9 136 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 MORN3Q6PF18 240 aaPredicted RBP3.59□□□□□ -1.83
NEK1-204ENST00000509912 PPP1R1CQ8WVI7 109 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 TAF9BQ9HBM6 251 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 V9GYY9 64 aa3.59□□□□□ -1.83
NEK1-204ENST00000509912 ZNF727A8MUV8 499 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 F6UB75 175 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 IGKV1D-33P01593 117 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 IGKV1-33P01594 117 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 RPL7P18124 248 aaKnown RBP3.59□□□□□ -1.84
NEK1-204ENST00000509912 HNRNPA3P51991 378 aaKnown RBP3.59□□□□□ -1.84
NEK1-204ENST00000509912 CXCL6P80162 114 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 SP6Q3SY56 376 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 KIAA2026Q5HYC2 2103 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 PPP1R27Q86WC6 154 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 ZNF502Q8TBZ5 544 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 DUX3Q96PT4 197 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 SPIN2AQ99865 258 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 SPIN2BQ9BPZ2 258 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 NPVFQ9HCQ7 196 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 TP53TG3Q9ULZ0 132 aa3.59□□□□□ -1.84
NEK1-204ENST00000509912 RYR3Q15413 4870 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 KANTRA0A1W2PQU2 76 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 FABP5P3A8MUU1 101 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 NDUFA4O00483 81 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 TAX1BP3O14907 124 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 SCTP09683 121 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 P0C879 139 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 SMIM17P0DL12 118 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 NTF3P20783 257 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 PSG9Q00887 426 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 TEX43Q6ZNM6 134 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 GTSF1Q8WW33 167 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 SCGB3A2Q96PL1 93 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 NIPSNAP3BQ9BS92 247 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 LOC107984640A0A0U1RRK4 108 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 A0A1B0GW64 132 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 FAM231BA6NCW3 169 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 ORM1P02763 201 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 FAM162BQ5T6X4 162 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 ARPC1AQ92747 370 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 VSIG2Q96IQ7 327 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 NBEAL2Q6ZNJ1 2754 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 DNAH7Q8WXX0 4024 aa3.58□□□□□ -1.84
NEK1-204ENST00000509912 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 NPY1RP25929 384 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 RHOBP62745 196 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 DEFB136Q30KP8 78 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 TMEM78Q5T7P6 136 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 ZNF709Q8N972 641 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 UBALD1Q8TB05 177 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 LINC00467Q9BRT7 94 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 IGKV1-6A0A0C4DH72 117 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 TINCRA0A1B0GVN0 87 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 CRYM-AS1A6NIL9 109 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 PPYP01298 95 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 SAA2P0DJI9 122 aaPredicted RBP3.57□□□□□ -1.84
NEK1-204ENST00000509912 REG1BP48304 166 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 COA6Q5JTJ3 125 aaKnown RBP3.57□□□□□ -1.84
NEK1-204ENST00000509912 FAM19A5Q7Z5A7 132 aaPredicted RBP3.57□□□□□ -1.84
NEK1-204ENST00000509912 Q8N377 158 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 UQCR10Q9UDW1 63 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
NEK1-204ENST00000509912 IGLC7A0M8Q6 106 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms