RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 Q6ZTI0 123 aa13.91□□□□□ -0.18
FGFR4-211ENST00000509511 KCNS1Q96KK3 526 aa13.91□□□□□ -0.18
FGFR4-211ENST00000509511 SDF2L1Q9HCN8 221 aa13.91□□□□□ -0.18
FGFR4-211ENST00000509511 GNG13Q9P2W3 67 aa13.91□□□□□ -0.18
FGFR4-211ENST00000509511 APLNQ9ULZ1 77 aa13.91□□□□□ -0.18
FGFR4-211ENST00000509511 TRGV1A0A0A0MS02 117 aa13.9□□□□□ -0.18
FGFR4-211ENST00000509511 KLF12Q9Y4X4 402 aa13.9□□□□□ -0.18
FGFR4-211ENST00000509511 TRGV2A0A075B6R0 118 aa13.9□□□□□ -0.19
FGFR4-211ENST00000509511 F5H768 121 aa13.9□□□□□ -0.19
FGFR4-211ENST00000509511 IFNA1P01562 189 aa13.9□□□□□ -0.19
FGFR4-211ENST00000509511 LGALS9CQ6DKI2 356 aa13.9□□□□□ -0.19
FGFR4-211ENST00000509511 TMEM88Q6PEY1 159 aa13.9□□□□□ -0.19
FGFR4-211ENST00000509511 SCO2A0A1W2PP80 73 aa13.89□□□□□ -0.19
FGFR4-211ENST00000509511 SPINK4O60575 86 aa13.89□□□□□ -0.19
FGFR4-211ENST00000509511 ZNF80P51504 273 aaPredicted RBP13.89□□□□□ -0.19
FGFR4-211ENST00000509511 LGALS9BQ3B8N2 356 aa13.89□□□□□ -0.19
FGFR4-211ENST00000509511 ALKAL2Q6UX46 152 aa13.89□□□□□ -0.19
FGFR4-211ENST00000509511 ZFP30Q9Y2G7 519 aa13.89□□□□□ -0.19
FGFR4-211ENST00000509511 TRBV6-1A0A0K0K1D8 114 aa13.88□□□□□ -0.19
FGFR4-211ENST00000509511 TYMSP04818 313 aa13.88□□□□□ -0.19
FGFR4-211ENST00000509511 CCL20P78556 96 aa13.88□□□□□ -0.19
FGFR4-211ENST00000509511 C18orf15Q96N68 181 aa13.88□□□□□ -0.19
FGFR4-211ENST00000509511 MDFICQ9P1T7 246 aa13.88□□□□□ -0.19
FGFR4-211ENST00000509511 LTAP01374 205 aa13.87□□□□□ -0.19
FGFR4-211ENST00000509511 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
FGFR4-211ENST00000509511 C15orf53Q8NAA6 179 aa13.87□□□□□ -0.19
FGFR4-211ENST00000509511 TXNDC17Q9BRA2 123 aa13.87□□□□□ -0.19
FGFR4-211ENST00000509511 SPXQ9BT56 116 aa13.87□□□□□ -0.19
FGFR4-211ENST00000509511 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
FGFR4-211ENST00000509511 IGHV3-16A0A0C4DH30 117 aa13.86□□□□□ -0.19
FGFR4-211ENST00000509511 BCL2P10415 239 aa13.85□□□□□ -0.19
FGFR4-211ENST00000509511 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
FGFR4-211ENST00000509511 BOLA1Q9Y3E2 137 aa13.85□□□□□ -0.19
FGFR4-211ENST00000509511 GNRH2O43555 120 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 P0DMU3 169 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 FAM231AP0DMU4 169 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 FAM231CP0DMU5 169 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
FGFR4-211ENST00000509511 FAM162BQ5T6X4 162 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 COX8CQ7Z4L0 72 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 C11orf52Q96A22 123 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 C11orf21Q9P2W6 132 aa13.84□□□□□ -0.19
FGFR4-211ENST00000509511 FABP5P3A8MUU1 101 aa13.83□□□□□ -0.2
FGFR4-211ENST00000509511 TAGLN2P37802 199 aaKnown RBP13.83□□□□□ -0.2
FGFR4-211ENST00000509511 BLOC1S1P78537 153 aa13.83□□□□□ -0.2
FGFR4-211ENST00000509511 OR5I1Q13606 314 aa13.83□□□□□ -0.2
FGFR4-211ENST00000509511 M0R2P5 195 aa13.82□□□□□ -0.2
FGFR4-211ENST00000509511 PDE6DO43924 150 aa13.82□□□□□ -0.2
FGFR4-211ENST00000509511 HOXA5P20719 270 aa13.82□□□□□ -0.2
FGFR4-211ENST00000509511 HYDINQ4G0P3 5121 aa13.82□□□□□ -0.2
FGFR4-211ENST00000509511 TRAV26-1A0A087WT03 109 aa13.81□□□□□ -0.2
FGFR4-211ENST00000509511 SH2D1AO60880 128 aa13.81□□□□□ -0.2
FGFR4-211ENST00000509511 RPL35P42766 123 aaKnown RBP13.81□□□□□ -0.2
FGFR4-211ENST00000509511 NHLRC2Q8NBF2 726 aa13.81□□□□□ -0.2
FGFR4-211ENST00000509511 RASL10AQ92737 203 aa13.81□□□□□ -0.2
FGFR4-211ENST00000509511 ORM1P02763 201 aa13.8□□□□□ -0.2
FGFR4-211ENST00000509511 BAGE2Q86Y30 109 aa13.8□□□□□ -0.2
FGFR4-211ENST00000509511 VAX2Q9UIW0 290 aa13.8□□□□□ -0.2
FGFR4-211ENST00000509511 B4DEV8 164 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 NUDT3O95989 172 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 IGHV3-53P01767 116 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 ASIPP42127 132 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 ZNF674Q2M3X9 581 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
FGFR4-211ENST00000509511 IGKV3D-20A0A0C4DH25 116 aa13.78□□□□□ -0.2
FGFR4-211ENST00000509511 M0R036 132 aa13.78□□□□□ -0.2
FGFR4-211ENST00000509511 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
FGFR4-211ENST00000509511 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
FGFR4-211ENST00000509511 DERL1Q9BUN8 251 aa13.78□□□□□ -0.2
FGFR4-211ENST00000509511 VPS13DQ5THJ4 4388 aa13.78□□□□□ -0.2
FGFR4-211ENST00000509511 A0A0J9YY99 117 aa13.77□□□□□ -0.21
FGFR4-211ENST00000509511 H3BNG1 76 aa13.77□□□□□ -0.21
FGFR4-211ENST00000509511 CRIP1P50238 77 aa13.77□□□□□ -0.21
FGFR4-211ENST00000509511 CENPWQ5EE01 88 aa13.77□□□□□ -0.21
FGFR4-211ENST00000509511 TRAV4A0A0B4J268 109 aa13.76□□□□□ -0.21
FGFR4-211ENST00000509511 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
FGFR4-211ENST00000509511 POM121L12Q8N7R1 296 aa13.76□□□□□ -0.21
FGFR4-211ENST00000509511 MLST8Q9BVC4 326 aa13.76□□□□□ -0.21
FGFR4-211ENST00000509511 KRBOX1C9JBD0 128 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 C9JCJ5 164 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 RNASE3P12724 160 aaKnown RBP13.75□□□□□ -0.21
FGFR4-211ENST00000509511 GNG4P50150 75 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 SLAQ13239 276 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 ZNF876PQ49A33 203 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 PRR27Q6MZM9 219 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 OR4C5Q8NGB2 326 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 LYPD6BQ8NI32 183 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 MED9Q9NWA0 146 aa13.75□□□□□ -0.21
FGFR4-211ENST00000509511 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 H3BVH4 76 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 SFTA3P0C7M3 94 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 SMIM12Q96EX1 92 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 IL36BQ9NZH7 164 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 PRO0255Q9UI72 69 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 MUC4Q99102 2169 aa13.74□□□□□ -0.21
FGFR4-211ENST00000509511 RNF212Q495C1 297 aa13.73□□□□□ -0.21
FGFR4-211ENST00000509511 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
FGFR4-211ENST00000509511 TMSB15BA0A087X1C1 80 aa13.72□□□□□ -0.21
FGFR4-211ENST00000509511 FHL2Q14192 279 aa13.72□□□□□ -0.21
FGFR4-211ENST00000509511 ZNF506Q5JVG8 444 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms