RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZNF492Q9P255 531 aa3.29□□□□□ -1.88
NIPBL-206ENST00000509429 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 A0A1W2PQD3 144 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 C2orf70A6NJV1 201 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 F2Z2F3 143 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 CCL4P13236 92 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 AQP1P29972 269 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 RNASE4P34096 147 aaKnown RBP3.28□□□□□ -1.88
NIPBL-206ENST00000509429 DEFB121Q5J5C9 76 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 GUSBP11Q6P575 273 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 LINC00173Q6ZV60 143 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 SCXQ7RTU7 201 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 LINC00643Q86TS7 51 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 CLECL1Q8IZS7 167 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 CD177Q8N6Q3 437 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 CLDND2Q8NHS1 167 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 C11orf52Q96A22 123 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 NPCDR1Q9BY65 106 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 ABRACLQ9P1F3 81 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 ANAPC1Q9H1A4 1944 aa3.28□□□□□ -1.88
NIPBL-206ENST00000509429 HEATR5AQ86XA9 2040 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV1-24A0A0C4DH33 117 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV4-30-4P0DP06 118 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 SLC25A16P16260 332 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 RPL30P62888 115 aaKnown RBP3.27□□□□□ -1.89
NIPBL-206ENST00000509429 KIF26BQ2KJY2 2108 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 TMEM170BQ5T4T1 132 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 Q6P435 159 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
NIPBL-206ENST00000509429 CYP2G1PQ6ZSU1 146 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 MED12LQ86YW9 2145 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 TMEM252Q8N6L7 170 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 LINC01555Q8NAE3 123 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 ITLN1Q8WWA0 313 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 ITLN2Q8WWU7 325 aaPredicted RBP3.27□□□□□ -1.89
NIPBL-206ENST00000509429 SPTSSAQ969W0 71 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 ZNF714Q96N38 554 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 HILPDAQ9Y5L2 63 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 FER1L5A0AVI2 2057 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 PIKFYVEQ9Y2I7 2098 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 POLEQ07864 2286 aa3.27□□□□□ -1.89
NIPBL-206ENST00000509429 ANKRD12Q6UB98 2062 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV1OR15-1A0A075B7D0 117 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV1-45A0A0A0MS14 117 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 BCE1O60756 84 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 FRMD6-AS1P0C7T7 363 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 LINC00271P0C7V0 271 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV3-43DP0DP04 118 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
NIPBL-206ENST00000509429 CKS2P33552 79 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 FUSP35637 526 aaKnown RBP eCLIP3.26□□□□□ -1.89
NIPBL-206ENST00000509429 SPINT3P49223 89 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 UBE2AP49459 152 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 IGFL3Q6UXB1 125 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 CXCL17Q6UXB2 119 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 FLVCR1-AS1Q8TAF5 88 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 RNASE6Q93091 150 aaKnown RBP3.26□□□□□ -1.89
NIPBL-206ENST00000509429 IL36BQ9NZH7 164 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 CSAG2Q9Y5P2 127 aa3.26□□□□□ -1.89
NIPBL-206ENST00000509429 A0A1B0GW54 56 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 A6NN06 94 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 E7EQL1 145 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 C19orf84I3L1E1 186 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 NDUFC1O43677 76 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 FGF12P61328 243 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 GNB1P62873 340 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 SSBP1Q04837 148 aaKnown RBP3.25□□□□□ -1.89
NIPBL-206ENST00000509429 REG3AQ06141 175 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 CIRBPQ14011 172 aaKnown RBP3.25□□□□□ -1.89
NIPBL-206ENST00000509429 ZNF56Q15929 161 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 Q1T7F1 81 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 C6orf201Q7Z4U5 140 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 ZNF645Q8N7E2 425 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 SMIM14Q96QK8 99 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 SLC50A1Q9BRV3 221 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 CMC2Q9NRP2 79 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 TAS2R4Q9NYW5 299 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 LINC00474Q9P2X8 69 aa3.25□□□□□ -1.89
NIPBL-206ENST00000509429 COL4A2P08572 1712 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 EML6Q6ZMW3 1958 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 A0A087X002 238 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 TRGV8A0A0C4DH27 118 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV4-61A0A0C4DH41 118 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 A0A1W2PNU3 283 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-206ENST00000509429 TCRBV4S1A1TA0A5B7 111 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 IGLV2-8P01709 118 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV4-59P01825 116 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 PRH1P02810 166 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 HMGA1P17096 107 aaKnown RBP3.24□□□□□ -1.89
NIPBL-206ENST00000509429 IGHV1-2P23083 117 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 CCL14Q16627 93 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 FAM104BQ5XKR9 115 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 LYPD5Q6UWN5 251 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 C16orf47Q6ZP98 133 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-206ENST00000509429 SDIM1Q6ZPB5 146 aa3.24□□□□□ -1.89
NIPBL-206ENST00000509429 DOCK7Q96N67 2140 aa3.23□□□□□ -1.89
NIPBL-206ENST00000509429 MUC22E2RYF6 1773 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms