RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CT83Q5H943 113 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 PSMG4Q5JS54 123 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 TMEM78Q5T7P6 136 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 IMMP2LQ96T52 175 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 SAV1Q9H4B6 383 aaPredicted RBP10.52□□□□□ -0.72
HMGCL-208ENST00000509389 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 X6R8D5 127 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 F6UB75 175 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 CT45A10P0DMU9 189 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.73
HMGCL-208ENST00000509389 CRIP1P50238 77 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 DEFB1P60022 68 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 IBA57Q5T440 356 aaKnown RBP10.52□□□□□ -0.73
HMGCL-208ENST00000509389 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 OR10G8Q8NGN5 311 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 C8orf49Q96NF6 230 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
HMGCL-208ENST00000509389 HERC2O95714 4834 aa10.51□□□□□ -0.73
HMGCL-208ENST00000509389 H7BYZ3 331 aa10.51□□□□□ -0.73
HMGCL-208ENST00000509389 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
HMGCL-208ENST00000509389 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
HMGCL-208ENST00000509389 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
HMGCL-208ENST00000509389 TMEM88Q6PEY1 159 aa10.51□□□□□ -0.73
HMGCL-208ENST00000509389 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
HMGCL-208ENST00000509389 RNASE7Q9H1E1 156 aaKnown RBP10.51□□□□□ -0.73
HMGCL-208ENST00000509389 KLLNB2CW77 178 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 HLA-DRB4P13762 266 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 ERVFC1-1P60608 527 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 BTN1A1Q13410 526 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 SMUG1Q53HV7 270 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 AMTNQ6UX39 209 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 Q6ZTC4 211 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 C15orf54Q8N8G6 183 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 NUDT10Q8NFP7 164 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 OR4B1Q8NGF8 309 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 NUDT11Q96G61 164 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 KRTAP17-1Q9BYP8 105 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 HLA-DRB4X5D2U9 266 aa10.5□□□□□ -0.73
HMGCL-208ENST00000509389 TRAV10A0A0B4J240 114 aa10.49□□□□□ -0.73
HMGCL-208ENST00000509389 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
HMGCL-208ENST00000509389 ZNF705DP0CH99 300 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-208ENST00000509389 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-208ENST00000509389 ZNF80P51504 273 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-208ENST00000509389 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-208ENST00000509389 PRR9Q5T870 116 aa10.49□□□□□ -0.73
HMGCL-208ENST00000509389 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
HMGCL-208ENST00000509389 ELOBQ15370 118 aa10.48□□□□□ -0.73
HMGCL-208ENST00000509389 FAM162BQ5T6X4 162 aa10.48□□□□□ -0.73
HMGCL-208ENST00000509389 RPP21Q9H633 154 aaKnown RBP10.48□□□□□ -0.73
HMGCL-208ENST00000509389 IL36BQ9NZH7 164 aa10.48□□□□□ -0.73
HMGCL-208ENST00000509389 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 TRAV9-1A0A075B6T8 112 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 SMIM27A0A1W2PRY6 76 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 FAM231BA6NCW3 169 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 COLCA2A8K830 154 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 H3BMM0 161 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 SH2D1AO60880 128 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 Q6AWC8 147 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 EBLN2Q6P2I7 272 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 CELA1Q9UNI1 258 aa10.47□□□□□ -0.73
HMGCL-208ENST00000509389 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.74
HMGCL-208ENST00000509389 P01737 135 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 C12orf74Q32Q52 190 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 LINC01559Q495D7 138 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 ZNF575Q86XF7 245 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 GFRA4Q9GZZ7 299 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 XCL2Q9UBD3 114 aa10.46□□□□□ -0.74
HMGCL-208ENST00000509389 CXCL1P09341 107 aa10.45□□□□□ -0.74
HMGCL-208ENST00000509389 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
HMGCL-208ENST00000509389 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
HMGCL-208ENST00000509389 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
HMGCL-208ENST00000509389 DEFB131BA0A096LNP1 70 aa10.44□□□□□ -0.74
HMGCL-208ENST00000509389 FABP5P3A8MUU1 101 aa10.44□□□□□ -0.74
HMGCL-208ENST00000509389 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
HMGCL-208ENST00000509389 TYMSP04818 313 aa10.44□□□□□ -0.74
HMGCL-208ENST00000509389 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
HMGCL-208ENST00000509389 C11orf21Q9P2W6 132 aa10.44□□□□□ -0.74
HMGCL-208ENST00000509389 A8MWL6 223 aa10.43□□□□□ -0.74
HMGCL-208ENST00000509389 LEPP41159 167 aa10.43□□□□□ -0.74
HMGCL-208ENST00000509389 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
HMGCL-208ENST00000509389 AMBPP02760 352 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 CDKN1BP46527 198 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
HMGCL-208ENST00000509389 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 NEU1Q99519 415 aa10.42□□□□□ -0.74
HMGCL-208ENST00000509389 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 C7orf71A4D174 169 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 CRXO43186 299 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-208ENST00000509389 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
HMGCL-208ENST00000509389 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
HMGCL-208ENST00000509389 IGLC6P0CF74 106 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms