RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 RNF185Q96GF1 192 aa16.79■□□□□ 0.28
SPCS3-203ENST00000507678 CLUHP3Q96NS8 147 aa16.79■□□□□ 0.28
SPCS3-203ENST00000507678 F6UB75 175 aa16.79■□□□□ 0.28
SPCS3-203ENST00000507678 EDN2P20800 178 aa16.79■□□□□ 0.28
SPCS3-203ENST00000507678 TM4SF20Q53R12 229 aa16.79■□□□□ 0.28
SPCS3-203ENST00000507678 C7orf71A4D174 169 aa16.78■□□□□ 0.28
SPCS3-203ENST00000507678 G3V4G9 280 aa16.78■□□□□ 0.28
SPCS3-203ENST00000507678 C18orf15Q96N68 181 aa16.78■□□□□ 0.28
SPCS3-203ENST00000507678 FBN2P35556 2912 aa16.78■□□□□ 0.28
SPCS3-203ENST00000507678 B4DSR2 109 aa16.78■□□□□ 0.28
SPCS3-203ENST00000507678 GPHB5Q86YW7 130 aa16.77■□□□□ 0.28
SPCS3-203ENST00000507678 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.27
SPCS3-203ENST00000507678 CRIP2P52943 208 aaPredicted RBP16.77■□□□□ 0.27
SPCS3-203ENST00000507678 LINC01545Q5VT33 79 aa16.77■□□□□ 0.27
SPCS3-203ENST00000507678 OR1N2Q8NGR9 330 aa16.77■□□□□ 0.27
SPCS3-203ENST00000507678 NPFFR1Q9GZQ6 430 aa16.77■□□□□ 0.27
SPCS3-203ENST00000507678 NDUFA4O00483 81 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 NAA38Q9BRA0 125 aaKnown RBP16.76■□□□□ 0.27
SPCS3-203ENST00000507678 USP24Q9UPU5 2620 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 H3BVH4 76 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 IGHV4-59P01825 116 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 HIST1H1AQ02539 215 aaPredicted RBP16.76■□□□□ 0.27
SPCS3-203ENST00000507678 C9orf47Q6ZRZ4 202 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 PSMG3-AS1Q96PY0 264 aa16.76■□□□□ 0.27
SPCS3-203ENST00000507678 CACNG7P62955 275 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 C10orf99Q6UWK7 81 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 SCRT2Q9NQ03 307 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 Q5PR19 223 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 SPANXN1Q5VSR9 72 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 C9orf139Q6ZV77 190 aa16.75■□□□□ 0.27
SPCS3-203ENST00000507678 HBDP02042 147 aa16.74■□□□□ 0.27
SPCS3-203ENST00000507678 MAP1LC3AQ9H492 121 aa16.74■□□□□ 0.27
SPCS3-203ENST00000507678 TNFRSF6BO95407 300 aa16.74■□□□□ 0.27
SPCS3-203ENST00000507678 SRSF2Q01130 221 aaKnown RBP16.74■□□□□ 0.27
SPCS3-203ENST00000507678 USMG5Q96IX5 58 aa16.74■□□□□ 0.27
SPCS3-203ENST00000507678 KIR3DS1Q14943 382 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 DEFB112Q30KQ8 113 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 WFDC12Q8WWY7 111 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 RHPN1-AS1Q9BWJ2 59 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 MRPL53Q96EL3 112 aaKnown RBP16.73■□□□□ 0.27
SPCS3-203ENST00000507678 CNFNQ9BYD5 112 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 ABCA12Q86UK0 2595 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 IGHV7-4-1A0A0J9YVY3 117 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 OR10J6PQ8NGY7 276 aa16.73■□□□□ 0.27
SPCS3-203ENST00000507678 PTPN13Q12923 2485 aa16.72■□□□□ 0.27
SPCS3-203ENST00000507678 UFSP1Q6NVU6 142 aa16.72■□□□□ 0.27
SPCS3-203ENST00000507678 TGFAP01135 160 aa16.72■□□□□ 0.27
SPCS3-203ENST00000507678 JMJD8Q96S16 334 aa16.71■□□□□ 0.27
SPCS3-203ENST00000507678 LEPP41159 167 aa16.71■□□□□ 0.26
SPCS3-203ENST00000507678 SAMD13Q5VXD3 122 aa16.71■□□□□ 0.26
SPCS3-203ENST00000507678 IFI27L1Q96BM0 104 aa16.71■□□□□ 0.26
SPCS3-203ENST00000507678 M0R381 172 aa16.7■□□□□ 0.26
SPCS3-203ENST00000507678 RNASE4P34096 147 aaKnown RBP16.7■□□□□ 0.26
SPCS3-203ENST00000507678 GTF2H5Q6ZYL4 71 aa16.69■□□□□ 0.26
SPCS3-203ENST00000507678 ATP6V0BQ99437 205 aa16.69■□□□□ 0.26
SPCS3-203ENST00000507678 AP1S3Q96PC3 154 aa16.69■□□□□ 0.26
SPCS3-203ENST00000507678 A0A0G2JLM5 398 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 H3BUT2 72 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 S100A4P26447 101 aaKnown RBP16.68■□□□□ 0.26
SPCS3-203ENST00000507678 C2orf91Q6ZV80 131 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 BBC3Q96PG8 261 aaPredicted RBP16.68■□□□□ 0.26
SPCS3-203ENST00000507678 TMEM8BA6NDV4 472 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 SOCS3O14543 225 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 IGLV1-40P01703 118 aa16.68■□□□□ 0.26
SPCS3-203ENST00000507678 ZFAND2AQ8N6M9 145 aa16.67■□□□□ 0.26
SPCS3-203ENST00000507678 DAZ1Q9NQZ3 744 aaKnown RBP16.67■□□□□ 0.26
SPCS3-203ENST00000507678 H3BUA1 57 aa16.67■□□□□ 0.26
SPCS3-203ENST00000507678 DKK2Q9UBU2 259 aa16.67■□□□□ 0.26
SPCS3-203ENST00000507678 LINC01356Q8N9X3 169 aa16.66■□□□□ 0.26
SPCS3-203ENST00000507678 OR2K2Q8NGT1 345 aa16.66■□□□□ 0.26
SPCS3-203ENST00000507678 LINC00477Q96M19 166 aa16.66■□□□□ 0.26
SPCS3-203ENST00000507678 TMEM238LA0A1B0GVL6 79 aa16.65■□□□□ 0.26
SPCS3-203ENST00000507678 RNF223E7ERA6 249 aa16.65■□□□□ 0.26
SPCS3-203ENST00000507678 TMEM97Q5BJF2 176 aa16.65■□□□□ 0.26
SPCS3-203ENST00000507678 MS4A6AQ9H2W1 248 aa16.65■□□□□ 0.26
SPCS3-203ENST00000507678 TMEM158Q8WZ71 300 aa16.65■□□□□ 0.26
SPCS3-203ENST00000507678 OVOL1O14753 267 aa16.64■□□□□ 0.26
SPCS3-203ENST00000507678 ANXA2RQ3ZCQ2 193 aa16.64■□□□□ 0.26
SPCS3-203ENST00000507678 NEGR1Q7Z3B1 354 aa16.64■□□□□ 0.26
SPCS3-203ENST00000507678 MXRA5Q9NR99 2828 aa16.64■□□□□ 0.25
SPCS3-203ENST00000507678 NAV2Q8IVL1 2488 aa16.64■□□□□ 0.25
SPCS3-203ENST00000507678 GNRH2O43555 120 aa16.64■□□□□ 0.25
SPCS3-203ENST00000507678 COX6B1P14854 86 aa16.64■□□□□ 0.25
SPCS3-203ENST00000507678 C9orf118A6NHY6 69 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 RAB37Q96AX2 223 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 GTSF1LQ9H1H1 148 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 TRAV21A0A0B4J279 112 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 K7EP34 96 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 PRSS1P07477 247 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 NXT2Q9NPJ8 142 aaKnown RBP16.63■□□□□ 0.25
SPCS3-203ENST00000507678 SEC11AP67812 179 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 CFHR3Q02985 330 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 LGALS9BQ3B8N2 356 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 LGALS9CQ6DKI2 356 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 SMPXQ9UHP9 88 aa16.63■□□□□ 0.25
SPCS3-203ENST00000507678 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 IGKV3-20P01619 116 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 COX8AP10176 69 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 SLC25A16P16260 332 aa16.62■□□□□ 0.25
SPCS3-203ENST00000507678 DUX5Q96PT3 197 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms