RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 Q6ZQT7 251 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 Q6ZTI0 123 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 MANBALQ9NQG1 85 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 TP53TG3Q9ULZ0 132 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 TRAV1-1A0A0B4J248 108 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 SPINK4O60575 86 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 PAGE4O60829 102 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 GCGP01275 180 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 C8orf49Q96NF6 230 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 SPXQ9BT56 116 aa11.77□□□□□ -0.53
SNCA-209ENST00000506244 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
SNCA-209ENST00000506244 AKR1C3P42330 323 aa11.76□□□□□ -0.53
SNCA-209ENST00000506244 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
SNCA-209ENST00000506244 S100A9P06702 114 aaKnown RBP11.75□□□□□ -0.53
SNCA-209ENST00000506244 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
SNCA-209ENST00000506244 TRBV6-1A0A0K0K1D8 114 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 IFNA1P01562 189 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 OR5I1Q13606 314 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 UBE2DNLQ8IWF7 75 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
SNCA-209ENST00000506244 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
SNCA-209ENST00000506244 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
SNCA-209ENST00000506244 TYMSP04818 313 aa11.73□□□□□ -0.53
SNCA-209ENST00000506244 ZNF80P51504 273 aaPredicted RBP11.73□□□□□ -0.53
SNCA-209ENST00000506244 GNG13Q9P2W3 67 aa11.73□□□□□ -0.53
SNCA-209ENST00000506244 H3BNG1 76 aa11.72□□□□□ -0.53
SNCA-209ENST00000506244 LTAP01374 205 aa11.72□□□□□ -0.53
SNCA-209ENST00000506244 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
SNCA-209ENST00000506244 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 M0R2P5 195 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 NUDT3O95989 172 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 RNF212Q495C1 297 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 RASL10AQ92737 203 aa11.71□□□□□ -0.53
SNCA-209ENST00000506244 HYDINQ4G0P3 5121 aa11.7□□□□□ -0.54
SNCA-209ENST00000506244 GNRH2O43555 120 aa11.7□□□□□ -0.54
SNCA-209ENST00000506244 HOXA5P20719 270 aa11.7□□□□□ -0.54
SNCA-209ENST00000506244 TAGLN2P37802 199 aaKnown RBP11.7□□□□□ -0.54
SNCA-209ENST00000506244 SLAQ13239 276 aa11.7□□□□□ -0.54
SNCA-209ENST00000506244 FAM162BQ5T6X4 162 aa11.7□□□□□ -0.54
SNCA-209ENST00000506244 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
SNCA-209ENST00000506244 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
SNCA-209ENST00000506244 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
SNCA-209ENST00000506244 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
SNCA-209ENST00000506244 CCL20P78556 96 aa11.68□□□□□ -0.54
SNCA-209ENST00000506244 ALKAL2Q6UX46 152 aa11.68□□□□□ -0.54
SNCA-209ENST00000506244 C11orf52Q96A22 123 aa11.68□□□□□ -0.54
SNCA-209ENST00000506244 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
SNCA-209ENST00000506244 VPS13DQ5THJ4 4388 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 MUC4Q99102 2169 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 TRAV4A0A0B4J268 109 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 A0A0J9YY99 117 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 B4DEV8 164 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 PDE6DO43924 150 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 IGHV3-53P01767 116 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 ORM1P02763 201 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 BCL2P10415 239 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 ASIPP42127 132 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 NKX2-5P52952 324 aaPredicted RBP11.67□□□□□ -0.54
SNCA-209ENST00000506244 CCL18P55774 89 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 BLOC1S1P78537 153 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 MEF2BQ02080 365 aaPredicted RBP11.67□□□□□ -0.54
SNCA-209ENST00000506244 PRO0255Q9UI72 69 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 DNAH6Q9C0G6 4158 aa11.67□□□□□ -0.54
SNCA-209ENST00000506244 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
SNCA-209ENST00000506244 SH2D1AO60880 128 aa11.66□□□□□ -0.54
SNCA-209ENST00000506244 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
SNCA-209ENST00000506244 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
SNCA-209ENST00000506244 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
SNCA-209ENST00000506244 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 PAX4O43316 350 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
SNCA-209ENST00000506244 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 PTH2Q96A98 100 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 VAX2Q9UIW0 290 aa11.65□□□□□ -0.54
SNCA-209ENST00000506244 CIDEAO60543 219 aa11.64□□□□□ -0.55
SNCA-209ENST00000506244 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
SNCA-209ENST00000506244 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
SNCA-209ENST00000506244 HHLA3Q9XRX5 114 aa11.64□□□□□ -0.55
SNCA-209ENST00000506244 ICOSQ9Y6W8 199 aa11.64□□□□□ -0.55
SNCA-209ENST00000506244 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 C9JCJ5 164 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 M0R036 132 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
SNCA-209ENST00000506244 CRIP1P50238 77 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 FHL2Q14192 279 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 PCNPQ8WW12 178 aaKnown RBP11.63□□□□□ -0.55
SNCA-209ENST00000506244 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
SNCA-209ENST00000506244 IL36BQ9NZH7 164 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms