RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
SGCA-205ENST00000505964 WFDC10AQ9H1F0 79 aa8.31□□□□□ -1.08
SGCA-205ENST00000505964 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
SGCA-205ENST00000505964 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 A8MWL6 223 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 CRXO43186 299 aaPredicted RBP8.3□□□□□ -1.08
SGCA-205ENST00000505964 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
SGCA-205ENST00000505964 CXCL1P09341 107 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 CASC10Q5T4H9 136 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 DEFB125Q8N687 156 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 C1QTNF4Q9BXJ3 329 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
SGCA-205ENST00000505964 TMEM189A5PLL7 270 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 J3KRW8 73 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
SGCA-205ENST00000505964 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 OR2D3Q8NGH3 330 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
SGCA-205ENST00000505964 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 LOC102724200A0A096LPH7 203 aaPredicted RBP8.28□□□□□ -1.08
SGCA-205ENST00000505964 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 IGKV3D-20A0A0C4DH25 116 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 KIR2DL5BA0A0G2JN68 375 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 KIR2DL5BA0A0G2JPC4 375 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 SMIM27A0A1W2PRY6 76 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 A8MZ25 164 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 INSP01308 110 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 ORM1P02763 201 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 S100PP25815 95 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
SGCA-205ENST00000505964 TDRG1Q3Y452 100 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 KIR2DL5AQ8N109 375 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 MUC7Q8TAX7 377 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 KCNS1Q96KK3 526 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 C11orf21Q9P2W6 132 aa8.28□□□□□ -1.08
SGCA-205ENST00000505964 SCO1O75880 301 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 RPL35AP18077 110 aaKnown RBP8.27□□□□□ -1.09
SGCA-205ENST00000505964 FXYD7P58549 80 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 DNLZQ5SXM8 178 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 FAM159AQ6UWV7 190 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 CBLN2Q8IUK8 224 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 PYGO2Q9BRQ0 406 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 CSTL1Q9H114 145 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 NAT8BQ9UHF3 227 aa8.27□□□□□ -1.09
SGCA-205ENST00000505964 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 CA1P00915 261 aaPredicted RBP8.26□□□□□ -1.09
SGCA-205ENST00000505964 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
SGCA-205ENST00000505964 APOC4P55056 127 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 RPL19P84098 196 aaKnown RBP8.26□□□□□ -1.09
SGCA-205ENST00000505964 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 TMEM88Q6PEY1 159 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 Q6ZQT7 251 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 YPEL4Q96NS1 127 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 NEU1Q99519 415 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 XCL2Q9UBD3 114 aa8.26□□□□□ -1.09
SGCA-205ENST00000505964 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 IGHV1OR15-1A0A075B7D0 117 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 LCE6AA0A183 80 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 IGLC6P0CF74 106 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 RBMY1A1P0DJD3 496 aaKnown RBP8.25□□□□□ -1.09
SGCA-205ENST00000505964 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 IGHV4-30-4P0DP06 118 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 ELOBQ15370 118 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 RBMY1FQ15415 496 aaKnown RBP8.25□□□□□ -1.09
SGCA-205ENST00000505964 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 NAGKQ9UJ70 344 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
SGCA-205ENST00000505964 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 TMSB15BA0A087X1C1 80 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 HIGD1CA8MV81 97 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 F2Z2F3 143 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 UBE2CO00762 179 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 TYMSP04818 313 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 GZMBP10144 247 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
SGCA-205ENST00000505964 MUC21Q5SSG8 566 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 C1orf158Q8N1D5 194 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 URGCP-MRPS24S4R325 110 aa8.24□□□□□ -1.09
SGCA-205ENST00000505964 GRIFINA4D1Z8 144 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 OR5AL1P0C617 328 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 CTRLP40313 264 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 ASIPP42127 132 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 TCL1AP56279 114 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 WDR73Q6P4I2 378 aa8.23□□□□□ -1.09
SGCA-205ENST00000505964 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms