RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 SAMD13Q5VXD3 122 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 Q5XG85 94 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 PPP1R2P3Q6NXS1 205 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 HRCT1Q6UXD1 115 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 BRK1Q8WUW1 75 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 NAT14Q8WUY8 206 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 DSCR8Q96T75 97 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 CBLN4Q9NTU7 201 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 COA4Q9NYJ1 87 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 COMMD3Q9UBI1 195 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRAPPC2LQ9UL33 140 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 BDP1A6H8Y1 2624 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 KDM6BO15054 1643 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 PCLOQ9Y6V0 5065 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 A0A096LNT2 108 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRBV10-1A0A0K0K1A3 114 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 TEX49A0A1B0GTD5 131 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 M0QZK8 103 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 SPINK1P00995 79 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 IGKCP01834 107 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 CCKP06307 115 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 NEFHP12036 1026 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 HIST1H1BP16401 226 aaKnown RBP0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 ADCYAP1P18509 176 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 VMO1Q7Z5L0 202 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM35BQ8NCS4 154 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR4S1Q8NGB4 309 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 OTOSQ8NHW6 89 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 SKA2Q8WVK7 121 aaPredicted RBP0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 CCDC115Q96NT0 180 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 PRR15LQ9BU68 103 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 PROK2Q9HC23 129 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 NINQ8N4C6 2090 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRPM7Q96QT4 1865 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 MED23Q9ULK4 1368 aa0.05□□□□□ -2.4
HMGB1P29-201ENST00000505659 PTPRGP23470 1445 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 ZCCHC6Q5VYS8 1495 aaKnown RBP0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 MUC2Q02817 5179 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRAV12-2A0A075B6T6 113 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRAV2A0A0B4J234 112 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 F2Z2F3 143 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 DPM2O94777 84 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR2H2O95918 312 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 FABP1P07148 127 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 MPC1LP0DKB6 136 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 RPL7P18124 248 aaKnown RBP0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 S100GP29377 79 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 PCBD1P61457 104 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 PLGLB1Q02325 96 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM128Q5BJH2 165 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 SMIM15Q7Z3B0 74 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR8I2Q8N0Y5 310 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 PPDPFLQ8WWR9 84 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM141Q96I45 108 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 TAS2R8Q9NYW2 309 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 METTL1Q9UBP6 276 aaKnown RBP0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 SMPXQ9UHP9 88 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 RNF213Q63HN8 5207 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 EPPK1P58107 5090 aaKnown RBP0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 HYDINQ4G0P3 5121 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 UBR4Q5T4S7 5183 aa0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.04□□□□□ -2.4
HMGB1P29-201ENST00000505659 MAP2P11137 1827 aaKnown RBP0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 NUP210Q8TEM1 1887 aaPredicted RBP0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 TANC2Q9HCD6 1990 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 RYR1P21817 5038 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRAV17A0A0B4J275 112 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 C9JAW5 83 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 TSTD3H0UI37 97 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 J3KT08 172 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 S100A5P33763 92 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 HSD17B12Q53GQ0 312 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 Q5BKY6 102 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 MAGOHBQ96A72 148 aaKnown RBP0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 DDA1Q9BW61 102 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 SLC35B3Q9H1N7 401 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 SPANXCQ9NY87 97 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 BET1LQ9NYM9 111 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 CALML5Q9NZT1 146 aa0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 AFDNP55196 1824 aaKnown RBP0.03□□□□□ -2.4
HMGB1P29-201ENST00000505659 OVOS2A0A0G2JMS6 1433 aa0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 KIAA1109Q2LD37 5005 aa0.03□□□□□ -2.41
HMGB1P29-201ENST00000505659 UNC13BO14795 1591 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 LAMC3Q9Y6N6 1575 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 WDR97A6NE52 1622 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 RREB1Q92766 1687 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 RBBP6Q7Z6E9 1792 aaKnown RBP0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 BORCS7-ASMTA0A0B4J1R7 106 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 TCRBV3S1A0A5B6 114 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 ZNF670-ZNF695F2Z2N8 137 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 YPEL1O60688 119 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SMIM24O75264 130 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 RBP4P02753 201 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 TCRAP04437 139 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SLC25A5P05141 298 aaKnown RBP0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 PYYP10082 97 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms