RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SPANXN1Q5VSR9 72 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 RPL7L1Q6DKI1 246 aaKnown RBP1.87□□□□□ -2.11
LINC01088-202ENST00000505149 C16orf47Q6ZP98 133 aaPredicted RBP1.87□□□□□ -2.11
LINC01088-202ENST00000505149 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 RETNLBQ9BQ08 111 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 SMIM7Q9BQ49 75 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 NHP2Q9NX24 153 aaKnown RBP1.87□□□□□ -2.11
LINC01088-202ENST00000505149 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
LINC01088-202ENST00000505149 SETBP1Q9Y6X0 1596 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 PREX2Q70Z35 1606 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 MROH1Q8NDA8 1641 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 SHANK2Q9UPX8 1470 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 C2orf16Q68DN1 1984 aa1.87□□□□□ -2.11
LINC01088-202ENST00000505149 FER1L6Q2WGJ9 1857 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 KMT2EQ8IZD2 1858 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 SPHKAPQ2M3C7 1700 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 MARF1Q9Y4F3 1742 aaKnown RBP1.86□□□□□ -2.11
LINC01088-202ENST00000505149 EDC4Q6P2E9 1401 aaKnown RBP1.86□□□□□ -2.11
LINC01088-202ENST00000505149 LY6HO94772 140 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 IGLV3-19P01714 112 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 ASAH2BP0C7U1 165 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CGB3P0DN86 165 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CGB7P0DN87 165 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
LINC01088-202ENST00000505149 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CFAP126Q5VTH2 177 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CYP2G1PQ6ZSU1 146 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 LINC00643Q86TS7 51 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 LINC00269Q8N2A0 174 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 RPRMLQ8N4K4 120 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 Q96M85 177 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 V9GYH0 126 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 TRIP11Q15643 1979 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 PXDNQ92626 1479 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CHD3Q12873 2000 aaKnown RBP1.86□□□□□ -2.11
LINC01088-202ENST00000505149 URB2Q14146 1524 aaKnown RBP1.86□□□□□ -2.11
LINC01088-202ENST00000505149 CLASP1Q7Z460 1538 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 SYCP2Q9BX26 1530 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 LRRIQ1Q96JM4 1722 aa1.86□□□□□ -2.11
LINC01088-202ENST00000505149 DENND4CQ5VZ89 1909 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 OTOFQ9HC10 1997 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGLV2-18A0A075B6J9 118 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGKV1D-17A0A075B6S4 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 FXYD6-FXYD2A0A087WZ82 144 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 A0A0D9SFI3 127 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 hDV103S1A0JD37 113 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 SNRPGP15A8MWD9 76 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 F2Z2F3 143 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 GNRH2O43555 120 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 BCE1O60756 84 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGKV1D-33P01593 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGKV1-33P01594 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGKV1-17P01599 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IGHV1-46P01743 117 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 MSMBP08118 114 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 TLX1NBP0CAT3 122 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 CXCL8P10145 99 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 ZNF791Q3KP31 576 aaPredicted RBP1.85□□□□□ -2.11
LINC01088-202ENST00000505149 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 Q6ZR03 302 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 SMCR5Q8TEV8 140 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 DYNLRB2Q8TF09 96 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 ODF3Q96PU9 254 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 FXYD6Q9H0Q3 95 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 RPP21Q9H633 154 aaKnown RBP1.85□□□□□ -2.11
LINC01088-202ENST00000505149 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 NDUFA12Q9UI09 145 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 IQSEC2Q5JU85 1478 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 MYH13Q9UKX3 1938 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 ABCC1P33527 1531 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 DOCK4Q8N1I0 1966 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 DIP2BQ9P265 1576 aa1.85□□□□□ -2.11
LINC01088-202ENST00000505149 KIF20BQ96Q89 1820 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 NCKAP5O14513 1909 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 MIA3Q5JRA6 1907 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 A0A1B0GVX0 72 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 TCRBV4S1A1TA0A5B7 111 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 TMEM223A0PJW6 202 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 C19orf71A6NCJ1 209 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 A8MWP4 228 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 LECT2O14960 151 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 TRGV3P03979 118 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 COX8AP10176 69 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.11
LINC01088-202ENST00000505149 ZNF117Q03924 483 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 ZNF56Q15929 161 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 ESRGQ1W209 222 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 C6orf201Q7Z4U5 140 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms