RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 SFRP2Q96HF1 295 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 OSTCQ9NRP0 149 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 CBY3A6NI87 242 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 APOC3P02656 99 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 RPS20P60866 119 aaKnown RBP10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 RRN3P1Q2M238 152 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 TDRG1Q3Y452 100 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 OR2D3Q8NGH3 330 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 OR10G8Q8NGN5 311 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 NEU1Q99519 415 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 B9D2Q9BPU9 175 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
CYSTM1-202ENST00000504227 TRGV11A0A075B6L2 103 aa10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 IGKV3D-20A0A0C4DH25 116 aa10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 MT-ND4LP03901 98 aa10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 SVBPQ8N300 66 aa10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 RPP21Q9H633 154 aaKnown RBP10.03□□□□□ -0.8
CYSTM1-202ENST00000504227 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 PPP1R2P9O14990 202 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 GNRH2O43555 120 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 RPL19P84098 196 aaKnown RBP10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 ZMAT4Q9H898 229 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 RETNQ9HD89 108 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 X6R8D5 127 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.81
CYSTM1-202ENST00000504227 GRIFINA4D1Z8 144 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 A8MWL6 223 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 SNAPINO95295 136 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 PRM2P04554 102 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 MIFP14174 115 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 AZU1P20160 251 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 ASIPP42127 132 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 CLRN3Q8NCR9 226 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 TP53TG3Q9ULZ0 132 aa10.01□□□□□ -0.81
CYSTM1-202ENST00000504227 TYMSP04818 313 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 CXCL1P09341 107 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
CYSTM1-202ENST00000504227 RNF212Q495C1 297 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 CT83Q5H943 113 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 TMEM263Q8WUH6 116 aaKnown RBP10□□□□□ -0.81
CYSTM1-202ENST00000504227 C16orf74Q96GX8 76 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 V9GYV3 84 aa10□□□□□ -0.81
CYSTM1-202ENST00000504227 IGHV3-16A0A0C4DH30 117 aa9.99□□□□□ -0.81
CYSTM1-202ENST00000504227 ZNF415Q09FC8 603 aa9.99□□□□□ -0.81
CYSTM1-202ENST00000504227 RHEBQ15382 184 aa9.99□□□□□ -0.81
CYSTM1-202ENST00000504227 DNLZQ5SXM8 178 aa9.99□□□□□ -0.81
CYSTM1-202ENST00000504227 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
CYSTM1-202ENST00000504227 IGHV4-28A0A0C4DH34 117 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 SNURFLB1AK76 121 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 GZMBP10144 247 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 RNASE8Q8TDE3 154 aaKnown RBP9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 RPS10P5Q9NQ39 176 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 TIMM8BQ9Y5J9 83 aaPredicted RBP9.98□□□□□ -0.81
CYSTM1-202ENST00000504227 A0A1W2PPQ1 181 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 ARMS2P0C7Q2 107 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 EMP1P54849 157 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 Q8NAQ8 132 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 C11orf72Q8NBR9 251 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 SPXQ9BT56 116 aa9.97□□□□□ -0.81
CYSTM1-202ENST00000504227 A0A087WWC5 75 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 FAM231BA6NCW3 169 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 H3BVH4 76 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 ATP6V1G1O75348 118 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 S100A1P23297 94 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 TCL1AP56279 114 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 TPPP3Q9BW30 176 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
CYSTM1-202ENST00000504227 F2Z2F3 143 aa9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 DEFB4AO15263 64 aa9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 IGLC6P0CF74 106 aa9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 DAZ2Q13117 558 aaKnown RBP9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 C9orf85Q96MD7 179 aa9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
CYSTM1-202ENST00000504227 SMIM27A0A1W2PRY6 76 aa9.94□□□□□ -0.82
CYSTM1-202ENST00000504227 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
CYSTM1-202ENST00000504227 HIGD1CA8MV81 97 aa9.94□□□□□ -0.82
CYSTM1-202ENST00000504227 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 527.5 ms