RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CTSZQ9UBR2 303 aa7.5□□□□□ -1.21
PDLIM5-207ENST00000503974 NOTCH2Q04721 2471 aa7.5□□□□□ -1.21
PDLIM5-207ENST00000503974 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 CR1P17927 2039 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 HAX1O00165 279 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 TRACP01848 142 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 ATP5G1P05496 136 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 ZNF138P52744 262 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 LYPD2Q6UXB3 125 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 Q6ZRM9 215 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 DEFB108BQ8NET1 73 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 RITA1Q96K30 269 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 EPDR1Q9UM22 224 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
PDLIM5-207ENST00000503974 HLA-DMBP28068 263 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 PIGYQ3MUY2 71 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 Q8N7P7 452 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 MYOZ3Q8TDC0 251 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 MYO9AB2RTY4 2548 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 IGKV2D-26A0A0A0MRZ7 120 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 CACNG7P62955 275 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 APRG1Q8IVJ8 170 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 CCL13Q99616 98 aa7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 HEYLQ9NQ87 328 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-207ENST00000503974 PMS2P5A8MQ11 134 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TIMM23O14925 209 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TFF1P04155 84 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 Q8N1Y9 231 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 FAM216BQ8N7L0 139 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TPSG1Q9NRR2 321 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TIMM8BQ9Y5J9 83 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TRGV11A0A075B6L2 103 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 LINC01619G3V211 115 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 PSPNO60542 156 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 HBBP68871 147 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 ZNF818PQ6ZRF7 136 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 OR8A1Q8NGG7 326 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 CACNG5Q9UF02 275 aa7.47□□□□□ -1.21
PDLIM5-207ENST00000503974 CREBBPQ92793 2442 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 H3BVH4 76 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 TCL1BO95988 128 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 NPYP01303 97 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 CEMP1Q6PRD7 247 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNRF1Q8ND25 227 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 IGF2BP2-AS1Q96M15 143 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 AKAP9Q99996 3911 aa7.46□□□□□ -1.22
PDLIM5-207ENST00000503974 NDUFB3O43676 98 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 CD24P25063 80 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 RPL13AP40429 203 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 IZUMO4Q1ZYL8 232 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 PRIMA1Q86XR5 153 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF503Q96F45 646 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF414Q96IQ9 312 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 SLC25A10Q9UBX3 287 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 DSCAML1Q8TD84 2053 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 OTOGQ6ZRI0 2925 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 A0A096LNJ9 63 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 C19orf71A6NCJ1 209 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 DPM2O94777 84 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKCP01834 107 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 RETNQ9HD89 108 aa7.45□□□□□ -1.22
PDLIM5-207ENST00000503974 TRAV13-1A0A0B4J241 112 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 LOC107984156A0A0G2JMH3 177 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 hADV29S1A0JD25 119 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 SLC25A20O43772 301 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 IGHV4-31P0DP07 118 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 ZFP36P26651 326 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 ARL17AQ8IVW1 177 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 TRGV9Q99603 122 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 DCTN5Q9BTE1 182 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 MALRD1Q5VYJ5 2156 aa7.44□□□□□ -1.22
PDLIM5-207ENST00000503974 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.44□□□□□ -1.224e-6■□□□□ 9.7
PDLIM5-207ENST00000503974 B4DSR2 109 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 LGALS9O00182 355 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 LGALS1P09382 135 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms