RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RPL19P84098 196 aaKnown RBP14.77□□□□□ -0.04
CDC42SE2-206ENST00000503291 TDRG1Q3Y452 100 aa14.77□□□□□ -0.04
CDC42SE2-206ENST00000503291 ZNF705GA8MUZ8 300 aaPredicted RBP14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 B4DEV8 164 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 LINC01559Q495D7 138 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 ZNF575Q86XF7 245 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 OR11H2Q8NH07 326 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 OVOL2Q9BRP0 275 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 OSTCQ9NRP0 149 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 TP53TG3Q9ULZ0 132 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 TMSB15BA0A087X1C1 80 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 TMEM189A5PLL7 270 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 GNRH2O43555 120 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 KCNS1Q96KK3 526 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 LINC00467Q9BRT7 94 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 RETNQ9HD89 108 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 TP53TG1Q9Y2A0 90 aa14.76□□□□□ -0.05
CDC42SE2-206ENST00000503291 CBY3A6NI87 242 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 C15orf54Q8N8G6 183 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 OR2D3Q8NGH3 330 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 X6R8D5 127 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 GATCO43716 136 aaKnown RBP14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 AZU1P20160 251 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 OR10G8Q8NGN5 311 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 B9D2Q9BPU9 175 aa14.75□□□□□ -0.05
CDC42SE2-206ENST00000503291 NEU1Q99519 415 aa14.74□□□□□ -0.05
CDC42SE2-206ENST00000503291 TM2D3Q9BRN9 247 aa14.74□□□□□ -0.05
CDC42SE2-206ENST00000503291 RPP21Q9H633 154 aaKnown RBP14.74□□□□□ -0.05
CDC42SE2-206ENST00000503291 TYMSP04818 313 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 RRN3P1Q2M238 152 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 SVBPQ8N300 66 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 CLRN3Q8NCR9 226 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 GRIFINA4D1Z8 144 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 RNF212Q495C1 297 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 V9GYV3 84 aa14.73□□□□□ -0.05
CDC42SE2-206ENST00000503291 SMIM9A6NGZ8 99 aa14.72□□□□□ -0.05
CDC42SE2-206ENST00000503291 SPATA25Q9BR10 227 aa14.72□□□□□ -0.05
CDC42SE2-206ENST00000503291 MT-ND4LP03901 98 aa14.71□□□□□ -0.05
CDC42SE2-206ENST00000503291 GZMBP10144 247 aa14.71□□□□□ -0.05
CDC42SE2-206ENST00000503291 MDFICQ9P1T7 246 aa14.71□□□□□ -0.05
CDC42SE2-206ENST00000503291 TRGV11A0A075B6L2 103 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 SNAPINO95295 136 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 RPS20P60866 119 aaKnown RBP14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 RNASE8Q8TDE3 154 aaKnown RBP14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 IGHV3-16A0A0C4DH30 117 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 XKRY2A2RUG3 117 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 C7orf77A4D0Y5 90 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 PPP1R2P9O14990 202 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 ATP6V1G1O75348 118 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 CT83Q5H943 113 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 TMEM263Q8WUH6 116 aaKnown RBP14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 ANAPC16Q96DE5 110 aa14.7□□□□□ -0.06
CDC42SE2-206ENST00000503291 A8MWL6 223 aa14.69□□□□□ -0.06
CDC42SE2-206ENST00000503291 S100A4P26447 101 aaKnown RBP14.69□□□□□ -0.06
CDC42SE2-206ENST00000503291 ASIPP42127 132 aa14.69□□□□□ -0.06
CDC42SE2-206ENST00000503291 MIFP14174 115 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 RHEBQ15382 184 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 ZNF493Q6ZR52 646 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 C11orf72Q8NBR9 251 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 ZMAT4Q9H898 229 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 GSN-AS1Q9NRJ2 163 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 CXCL1P09341 107 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 DNLZQ5SXM8 178 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 C16orf74Q96GX8 76 aa14.68□□□□□ -0.06
CDC42SE2-206ENST00000503291 TENM3Q9P273 2699 aa14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 IGHV4-28A0A0C4DH34 117 aa14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 RNASE3P12724 160 aaKnown RBP14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 Q8NAQ8 132 aa14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 TSKUQ8WUA8 353 aa14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 RPS10P5Q9NQ39 176 aa14.67□□□□□ -0.06
CDC42SE2-206ENST00000503291 PLAC8L1A1L4L8 177 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 DEFB4AO15263 64 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 ARMS2P0C7Q2 107 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 GTSF1Q8WW33 167 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 TIMM8BQ9Y5J9 83 aaPredicted RBP14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 H3BVH4 76 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 EMP1P54849 157 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 ZNF415Q09FC8 603 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 CTDSP1Q9GZU7 261 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 IL36BQ9NZH7 164 aa14.66□□□□□ -0.06
CDC42SE2-206ENST00000503291 ATRAIDQ6UW56 229 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 COL7A1Q02388 2944 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 A0A087WWC5 75 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 IGLC6P0CF74 106 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 TCL1AP56279 114 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 FER1L6-AS1Q8NA97 138 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 C9orf85Q96MD7 179 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 TPPP3Q9BW30 176 aa14.65□□□□□ -0.06
CDC42SE2-206ENST00000503291 SNURFLB1AK76 121 aa14.64□□□□□ -0.07
CDC42SE2-206ENST00000503291 SSBP4Q9BWG4 385 aaPredicted RBP14.64□□□□□ -0.07
CDC42SE2-206ENST00000503291 GFRA4Q9GZZ7 299 aa14.64□□□□□ -0.07
CDC42SE2-206ENST00000503291 SMIM27A0A1W2PRY6 76 aa14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 NHLRC4P0CG21 123 aaPredicted RBP14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 S100A1P23297 94 aa14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 FOXA3P55318 350 aaPredicted RBP14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 TMEM242Q9NWH2 141 aa14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 PRKDCP78527 4128 aaKnown RBP14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 A0A1W2PPQ1 181 aa14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
CDC42SE2-206ENST00000503291 HIGD1CA8MV81 97 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms