RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PPP1R1CQ8WVI7 109 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 DYDC1Q8WWB3 177 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 AP3S1Q92572 193 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 TMEM141Q96I45 108 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 CARD19Q96LW7 228 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 NUBP2Q9Y5Y2 271 aa-0.54□□□□□ -2.5
SMAD1-203ENST00000502342 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 CFDP00746 253 aaPredicted RBP-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 GNG3P63215 75 aa-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 SMIM20Q8N5G0 67 aa-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 BPESC1Q9GZL8 116 aa-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 KMT2AQ03164 3969 aa-0.55□□□□□ -2.5
SMAD1-203ENST00000502342 LRP2P98164 4655 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 HSPG2P98160 4391 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 TEX49A0A1B0GTD5 131 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 TMEM210A6NLX4 147 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 H7BYZ3 331 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 NMBP08949 121 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 SLC25A4P12235 298 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 TCTAP57738 103 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 BLCAPP62952 87 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 BASP1P80723 227 aaKnown RBP-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 LINC00305Q7Z4B0 112 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 OR5A2Q8NGI9 324 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 OR51A4Q8NGJ6 313 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 CDK13Q14004 1512 aaKnown RBP-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 TANC2Q9HCD6 1990 aa-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 NUP210Q8TEM1 1887 aaPredicted RBP-0.56□□□□□ -2.5
SMAD1-203ENST00000502342 TRAV12-2A0A075B6T6 113 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 TRBV27A0A0K0K1C4 114 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 APOC1P02654 83 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 PYYP10082 97 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 POLR2JP52435 117 aaKnown RBP-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 TAS2R41P59536 307 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 AKAP6Q13023 2319 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 ZANQ9Y493 2812 aa-0.57□□□□□ -2.5
SMAD1-203ENST00000502342 DOPEY2Q9Y3R5 2298 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 TRAV13-1A0A0B4J241 112 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 TRBV10-1A0A0K0K1A3 114 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 ZNF670-ZNF695F2Z2N8 137 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 IFNA21P01568 189 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 S100A11P31949 105 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 CKS2P33552 79 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 SRP9P49458 86 aaKnown RBP-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 LSM3P62310 102 aaKnown RBP-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 TMED4Q7Z7H5 227 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 STX19Q8N4C7 294 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 MORN4Q8NDC4 146 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 CHMP6Q96FZ7 201 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 BET1LQ9NYM9 111 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 LAMTOR2Q9Y2Q5 125 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 FAM135BQ49AJ0 1406 aa-0.58□□□□□ -2.5
SMAD1-203ENST00000502342 PTPRQQ9UMZ3 2332 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 MYH3P11055 1940 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 IGHV1-24A0A0C4DH33 117 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 APODP05090 189 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 ADCYAP1P18509 176 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 CRYGSP22914 178 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 LXNQ9BS40 222 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 STOML2Q9UJZ1 356 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 UFC1Q9Y3C8 167 aa-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 YTHDC2Q9H6S0 1430 aaKnown RBP-0.59□□□□□ -2.5
SMAD1-203ENST00000502342 SPTBN2O15020 2390 aa-0.6□□□□□ -2.5
SMAD1-203ENST00000502342 MUC2Q02817 5179 aa-0.6□□□□□ -2.5
SMAD1-203ENST00000502342 LRP5O75197 1615 aa-0.6□□□□□ -2.5
SMAD1-203ENST00000502342 ZNF292O60281 2723 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 GVQW2A0A096LPI5 108 aaPredicted RBP-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 TRAV17A0A0B4J275 112 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 H3BMG7 143 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 SMIM11BQ8TCY0 68 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 VIRMAQ69YN4 1812 aaKnown RBP-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 MYCBP2O75592 4640 aa-0.6□□□□□ -2.51
SMAD1-203ENST00000502342 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 MYH1P12882 1939 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 MAP1LC3B2A6NCE7 125 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 OR2H2O95918 312 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 COX4I1P13073 169 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 ELOF1P60002 83 aaKnown RBP-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 EMX2Q04743 252 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 DCUN1D2Q6PH85 259 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 OR4S1Q8NGB4 309 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 OTOSQ8NHW6 89 aa-0.61□□□□□ -2.51
SMAD1-203ENST00000502342 PTPRGP23470 1445 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 TCRBV3S1A0A5B6 114 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 RBAKDNA6NC62 111 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 PPP5D1E7EU14 171 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 M0QZK8 103 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 HBDP02042 147 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 TFF1P04155 84 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 SERPINB1P30740 379 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 MNS1Q8NEH6 495 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 VPS25Q9BRG1 176 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 CCDC32Q9BV29 185 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 LPAP08519 4548 aa-0.62□□□□□ -2.51
SMAD1-203ENST00000502342 SRRM2Q9UQ35 2752 aaKnown RBP-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 TRBV7-6A0A0J9YX20 115 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 PNMA8CA0A1B0GUJ8 204 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 PFDN1O60925 122 aa-0.63□□□□□ -2.51
SMAD1-203ENST00000502342 CRYBA4P53673 196 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms