RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR2D2Q9H210 308 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 BANF2Q9H503 90 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 RPP21Q9H633 154 aaKnown RBP2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 AK3Q9UIJ7 227 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 U3KQ87 197 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 CSPG4Q6UVK1 2322 aa2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 PRRC2AP48634 2157 aaKnown RBP2.93□□□□□ -1.94
HMGB1P21-201ENST00000502313 COL6A5A8TX70 2615 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 JMJD1CQ15652 2540 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 C2CD3Q4AC94 2353 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 MEIKINA0A087WXM9 373 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 TRAV38-1A0A0B4J264 116 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 IGKV1-9A0A0C4DH69 117 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 A0A1B0GVG6 124 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 DUXBA0A1W2PPF3 345 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 C7orf66A4D0T2 115 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 TMEM235A6NFC5 223 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 HLA-DQA1P01909 254 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 PMP2P02689 132 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 CTSDP07339 412 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF705DP0CH99 300 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF728P0DKX0 622 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 CGB3P0DN86 165 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 CGB7P0DN87 165 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 RBM11P57052 281 aaKnown RBP2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 KRTAP10-9P60411 292 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 SYCNQ0VAF6 134 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 PSG7Q13046 419 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF695Q8IW36 515 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR5AS1Q8N127 324 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF709Q8N972 641 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 FER1L6-AS1Q8NA97 138 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR2T35Q8NGX2 323 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZC2HC1AQ96GY0 325 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 B9D2Q9BPU9 175 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 PYGO2Q9BRQ0 406 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 GGACTQ9BVM4 153 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 C1QTNF6Q9BXI9 259 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 SMIM3Q9BZL3 60 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 NMES1Q9C002 83 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 C21orf62Q9NYP8 219 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 FREM3P0C091 2139 aa2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
HMGB1P21-201ENST00000502313 CADP27708 2225 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 A0A1B0GW64 132 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 KANTRA0A1W2PQU2 76 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 TMEM30CPA0ZSE6 113 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 C9orf170A2RU37 121 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 IZUMO1RA6ND01 250 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 IGLL5B9A064 214 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 I3L521 148 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 GEMIN2O14893 280 aaKnown RBP2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF73O43830 326 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF324O75467 553 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 IGKV1-5P01602 117 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 CD7P09564 240 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 S100A11P31949 105 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 MPV17P39210 176 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 RAB13P51153 203 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 HIST1H1AQ02539 215 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 SLC38A11Q08AI6 406 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 MSMO1Q15800 293 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 PRSS54Q6PEW0 395 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 SCXQ7RTU7 201 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 C6orf201Q7Z4U5 140 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 MED12LQ86YW9 2145 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 CD177Q8N6Q3 437 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR4S1Q8NGB4 309 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR8A1Q8NGG7 326 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR4C16Q8NGL9 310 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 OR10D4PQ8NGN7 298 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 TOMM6Q96B49 74 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 C2orf50Q96LR7 162 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 ZNF586Q9NXT0 402 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 SPANXCQ9NY87 97 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 FKBP11Q9NYL4 201 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 PHLDA3Q9Y5J5 127 aa2.91□□□□□ -1.94
HMGB1P21-201ENST00000502313 TRGV10A0A0A0MS01 117 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGHV3-43A0A0B4J1X8 118 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGHV1-18A0A0C4DH31 117 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 FAM168BA1KXE4 195 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 C9JAW5 83 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 C9JCJ5 164 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 M0R233 179 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 NDUFB3O43676 98 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 SFT2D2O95562 160 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 SRP19P09132 144 aaKnown RBP2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR5AC1P0C628 307 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC00869P0C866 280 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 SLC25A4P12235 298 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 SLC25A6P12236 298 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 TAS2R30P59541 319 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 CATR1Q13166 79 aa2.9□□□□□ -1.95
HMGB1P21-201ENST00000502313 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms