RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
MED28-202ENST00000499786 AGPAT4-IT1Q9H0P7 198 aa5.26□□□□□ -1.57
MED28-202ENST00000499786 NOTCH2Q04721 2471 aa5.26□□□□□ -1.57
MED28-202ENST00000499786 TEX15Q9BXT5 2789 aa5.26□□□□□ -1.57
MED28-202ENST00000499786 FLNBO75369 2602 aaKnown RBP5.26□□□□□ -1.57
MED28-202ENST00000499786 SONP18583 2426 aaKnown RBP5.25□□□□□ -1.57
MED28-202ENST00000499786 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 TRAV25A0A0B4J276 109 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 K7EQG2 157 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 UBE2CO00762 179 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 CRLF1O75462 422 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 GPX1P07203 203 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 CRISP2P16562 243 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 CAMPP49913 170 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 FHL3Q13643 280 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 BEAN1Q3B7T3 259 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 NSUN5P1Q3KNT7 163 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 FOXI2Q6ZQN5 318 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 TMEM136Q6ZRR5 245 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 SMIM15Q7Z3B0 74 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 NDUFA11Q86Y39 141 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 Q8N1X5 172 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 DLX4Q92988 240 aaPredicted RBP5.25□□□□□ -1.57
MED28-202ENST00000499786 DUX3Q96PT4 197 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 ODF3Q96PU9 254 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 SPAG8Q99932 426 aaPredicted RBP5.25□□□□□ -1.57
MED28-202ENST00000499786 NAGKQ9UJ70 344 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 SELENOKQ9Y6D0 94 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 MYO9AB2RTY4 2548 aa5.25□□□□□ -1.57
MED28-202ENST00000499786 ITPR2Q14571 2701 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 C5orf52A6NGY3 159 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 F2Z2F3 143 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 J3KRW8 73 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 CSN3P07498 182 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 ZNF705DP0CH99 300 aaPredicted RBP5.24□□□□□ -1.57
MED28-202ENST00000499786 ZNF705BP0CI00 300 aaPredicted RBP5.24□□□□□ -1.57
MED28-202ENST00000499786 GZMBP10144 247 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 EDN2P20800 178 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
MED28-202ENST00000499786 CTRLP40313 264 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 SSTP61278 116 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 BAGE3Q86Y29 109 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 GTSF1Q8WW33 167 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 CELSR1Q9NYQ6 3014 aa5.24□□□□□ -1.57
MED28-202ENST00000499786 VPS13CQ709C8 3753 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 A0A0J9YX75 114 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 A0A1B0GXF2 115 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 CYSRT1A8MQ03 144 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 F6UB75 175 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 SAP30O75446 220 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 ARMS2P0C7Q2 107 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 SRIP30626 198 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 RNASE4P34096 147 aaKnown RBP5.23□□□□□ -1.57
MED28-202ENST00000499786 ASIPP42127 132 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 CRIP1P50238 77 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 FOXA3P55318 350 aaPredicted RBP5.23□□□□□ -1.57
MED28-202ENST00000499786 CMC4P56277 68 aaPredicted RBP5.23□□□□□ -1.57
MED28-202ENST00000499786 PROK1P58294 105 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 LYZL1Q6UWQ5 148 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 TMEM61Q8N0U2 210 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 OR2K2Q8NGT1 345 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 TMEM18Q96B42 140 aa5.23□□□□□ -1.57
MED28-202ENST00000499786 C7orf71A4D174 169 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 PHOX2AO14813 284 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 ZNF80P51504 273 aaPredicted RBP5.22□□□□□ -1.57
MED28-202ENST00000499786 DEFB131AP59861 70 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 CACNG7P62955 275 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 TWIST1Q15672 202 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 DEFB114Q30KQ6 69 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 FAM159AQ6UWV7 190 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 KCNS1Q96KK3 526 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 SAMD10Q9BYL1 202 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 SIGLEC8Q9NYZ4 499 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 ACANP16112 2415 aa5.22□□□□□ -1.57
MED28-202ENST00000499786 GRIFINA4D1Z8 144 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 OR11H12B2RN74 326 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 H3BVH4 76 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 IGKV3-20P01619 116 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 IGLC6P0CF74 106 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 SMIM6P0DI80 62 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 FABP4P15090 132 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 CDKN1BP46527 198 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 SLAQ13239 276 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 KIAA1644Q3SXP7 199 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 CD300EQ496F6 205 aaPredicted RBP5.21□□□□□ -1.58
MED28-202ENST00000499786 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
MED28-202ENST00000499786 SPANXN1Q5VSR9 72 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 HIST3H2BBQ8N257 126 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 ZFAND2AQ8N6M9 145 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
MED28-202ENST00000499786 TIMM8BQ9Y5J9 83 aaPredicted RBP5.21□□□□□ -1.58
MED28-202ENST00000499786 TRGV11A0A075B6L2 103 aa5.2□□□□□ -1.58
MED28-202ENST00000499786 LOC102724200A0A096LPH7 203 aaPredicted RBP5.2□□□□□ -1.58
MED28-202ENST00000499786 KLLNB2CW77 178 aa5.2□□□□□ -1.58
MED28-202ENST00000499786 AMBPP02760 352 aa5.2□□□□□ -1.58
MED28-202ENST00000499786 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
MED28-202ENST00000499786 HLA-DRB4P13762 266 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms