RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SDF2L1	Q9HCN8	221 aa		7.39	□□□□□ -1.23
FXR1-222	ENST00000498658	TP53TG3	Q9ULZ0	132 aa		7.39	□□□□□ -1.23
FXR1-222	ENST00000498658	PSG8	Q9UQ74	426 aa		7.39	□□□□□ -1.23
FXR1-222	ENST00000498658	ARL2-SNX15	V9GYD0	113 aa		7.39	□□□□□ -1.23
FXR1-222	ENST00000498658	DNAH6	Q9C0G6	4158 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	NUDT3	O95989	172 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	FHIT	P49789	147 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	FGF8	P55075	233 aa	Predicted RBP	7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	CCL18	P55774	89 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	LGALSL	Q3ZCW2	172 aa	Predicted RBP	7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	SMUG1	Q53HV7	270 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	MUC21	Q5SSG8	566 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	TMUB2	Q71RG4	321 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	NAGK	Q9UJ70	344 aa		7.38	□□□□□ -1.23
FXR1-222	ENST00000498658	TRAV26-1	A0A087WT03	109 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	FAM74A7	A6NL05	159 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	PFN1	P07737	140 aa	Known RBP	7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	UBE2G2	P60604	165 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	TMEM183B	Q1AE95	376 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658		Q6ZNX1	250 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	PRNT	Q86SH4	94 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	TMEM183A	Q8IXX5	376 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	SFT2D1	Q8WV19	159 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	MBD3L1	Q8WWY6	194 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	TVP23C	Q96ET8	276 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	TMPRSS5	Q9H3S3	457 aa		7.37	□□□□□ -1.23
FXR1-222	ENST00000498658	TEX46	H3BTG2	121 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	PEX7	O00628	323 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	GCG	P01275	180 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	IGLV2-11	P01706	119 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	HOXA5	P20719	270 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	RAB5C	P51148	216 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	CST9LP1	Q5W188	147 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658		Q6ZQT7	251 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	FAM213B	Q8TBF2	198 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	RASL10A	Q92737	203 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	SGK494	Q96LW2	274 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658	MDFIC	Q9P1T7	246 aa		7.36	□□□□□ -1.23
FXR1-222	ENST00000498658		M0R2P5	195 aa		7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	H2AFB1	P0C5Y9	115 aa		7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	UBE2G1	P62253	170 aa		7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	FMC1	Q96HJ9	113 aa		7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	MRPL16	Q9NX20	251 aa	Known RBP	7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	ZFP30	Q9Y2G7	519 aa		7.35	□□□□□ -1.23
FXR1-222	ENST00000498658	IGHV3-16	A0A0C4DH30	117 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658		A0A0J9YY99	117 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	TRBV6-1	A0A0K0K1D8	114 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	FABP5P3	A8MUU1	101 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	CIDEA	O60543	219 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	C1QB	P02746	253 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	S100A9	P06702	114 aa	Known RBP	7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	LINC00336	Q6ZUF6	198 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	AKAP14	Q86UN6	197 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	C8orf49	Q96NF6	230 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	PRO0255	Q9UI72	69 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	HHLA3	Q9XRX5	114 aa		7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	TMA7	Q9Y2S6	64 aa	Known RBP	7.34	□□□□□ -1.23
FXR1-222	ENST00000498658	MUC4	Q99102	2169 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	PAX4	O43316	350 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	GNRH2	O43555	120 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	TYMS	P04818	313 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	SOHLH1	Q5JUK2	328 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	COX8C	Q7Z4L0	72 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658		Q86TA4	180 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	LINC00479	Q96M42	142 aa		7.33	□□□□□ -1.24
FXR1-222	ENST00000498658	TRAV4	A0A0B4J268	109 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	TRAV34	A0A0B4J273	112 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	TRGV4	A0A0C4DH28	118 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	PAGE4	O60829	102 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	AKR1C3	P42330	323 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	ZNF80	P51504	273 aa	Predicted RBP	7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	SLC51B	Q86UW2	128 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	OR4C5	Q8NGB2	326 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	PTH2	Q96A98	100 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	MANBAL	Q9NQG1	85 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	LINC00588	Q9Y4M8	146 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	ICOS	Q9Y6W8	199 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	DNAH10	Q8IVF4	4471 aa		7.32	□□□□□ -1.24
FXR1-222	ENST00000498658	IGLV2-18	A0A075B6J9	118 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	TRAV1-1	A0A0B4J248	108 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658		M0R2N4	97 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	IGHV3-53	P01767	116 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	ORM1	P02763	201 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	S100A4	P26447	101 aa	Known RBP	7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	CRYBA4	P53673	196 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	FHL2	Q14192	279 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	MRPL23	Q16540	153 aa	Known RBP	7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	ZNF876P	Q49A33	203 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	ZNRF2	Q8NHG8	242 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	PCNP	Q8WW12	178 aa	Known RBP	7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	VSIG2	Q96IQ7	327 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	TXNDC17	Q9BRA2	123 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	UPK3B	Q9BT76	320 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	EPPK1	P58107	5090 aa	Known RBP	7.31	□□□□□ -1.24
FXR1-222	ENST00000498658	FRAS1	Q86XX4	4008 aa		7.31	□□□□□ -1.24
FXR1-222	ENST00000498658		A0A096LPF7	62 aa		7.3	□□□□□ -1.24
FXR1-222	ENST00000498658		A0A1B0GV50	99 aa		7.3	□□□□□ -1.24
FXR1-222	ENST00000498658		C9JCJ5	164 aa		7.3	□□□□□ -1.24
FXR1-222	ENST00000498658	LTA	P01374	205 aa		7.3	□□□□□ -1.24
FXR1-222	ENST00000498658	ASIP	P42127	132 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms