RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
HSPG2-213ENST00000498495 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 A0A1B0GV50 99 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 PEX7O00628 323 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 GCGP01275 180 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 HOXA5P20719 270 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 RNF212Q495C1 297 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 SPXQ9BT56 116 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
HSPG2-213ENST00000498495 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
HSPG2-213ENST00000498495 TRAV26-1A0A087WT03 109 aa8.97□□□□□ -0.97
HSPG2-213ENST00000498495 A0A0J9YY99 117 aa8.97□□□□□ -0.97
HSPG2-213ENST00000498495 PAGE4O60829 102 aa8.97□□□□□ -0.97
HSPG2-213ENST00000498495 ZNF80P51504 273 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-213ENST00000498495 TYMSP04818 313 aa8.96□□□□□ -0.98
HSPG2-213ENST00000498495 PFN1P07737 140 aaKnown RBP8.96□□□□□ -0.98
HSPG2-213ENST00000498495 RAB5CP51148 216 aa8.96□□□□□ -0.98
HSPG2-213ENST00000498495 UBE2G1P62253 170 aa8.96□□□□□ -0.98
HSPG2-213ENST00000498495 ARL2-SNX15V9GYD0 113 aa8.96□□□□□ -0.98
HSPG2-213ENST00000498495 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 FABP5P3A8MUU1 101 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 IGHV3-53P01767 116 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 CCL18P55774 89 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 SLC51BQ86UW2 128 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 RASL10AQ92737 203 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 TCEAL7Q9BRU2 100 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 ZFP30Q9Y2G7 519 aa8.95□□□□□ -0.98
HSPG2-213ENST00000498495 H3BNG1 76 aa8.94□□□□□ -0.98
HSPG2-213ENST00000498495 TEX46H3BTG2 121 aa8.94□□□□□ -0.98
HSPG2-213ENST00000498495 M0R2P5 195 aa8.94□□□□□ -0.98
HSPG2-213ENST00000498495 SLAQ13239 276 aa8.94□□□□□ -0.98
HSPG2-213ENST00000498495 FMC1Q96HJ9 113 aa8.94□□□□□ -0.98
HSPG2-213ENST00000498495 M0R2N4 97 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 AKR1C3P42330 323 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 SULT1A2P50226 295 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 FAM3BP58499 235 aaPredicted RBP8.93□□□□□ -0.98
HSPG2-213ENST00000498495 Q86TA4 180 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 C11orf21Q9P2W6 132 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 HHLA3Q9XRX5 114 aa8.93□□□□□ -0.98
HSPG2-213ENST00000498495 IGLV2-18A0A075B6J9 118 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 PAX4O43316 350 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
HSPG2-213ENST00000498495 FHL2Q14192 279 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
HSPG2-213ENST00000498495 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 IGKV3D-20A0A0C4DH25 116 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 C9JCJ5 164 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 ORM1P02763 201 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 SFTA3P0C7M3 94 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
HSPG2-213ENST00000498495 CCL20P78556 96 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 OR4C5Q8NGB2 326 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 ZNF479Q96JC4 524 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 MANBALQ9NQG1 85 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 GNG13Q9P2W3 67 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
HSPG2-213ENST00000498495 VPS13DQ5THJ4 4388 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 KMT2AQ03164 3969 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 A0A1B0GVG6 124 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 LTAP01374 205 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 CRIP1P50238 77 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 CRYBA4P53673 196 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 ZNF876PQ49A33 203 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 ZC2HC1AQ96GY0 325 aa8.9□□□□□ -0.98
HSPG2-213ENST00000498495 A0A096LPF7 62 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 SCO2A0A1W2PP80 73 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 B4DEV8 164 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 ESRGQ1W209 222 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 FAM162BQ5T6X4 162 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 ICOSQ9Y6W8 199 aa8.89□□□□□ -0.99
HSPG2-213ENST00000498495 M0R036 132 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 SH2D1AO60880 128 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 RNASE3P12724 160 aaKnown RBP8.88□□□□□ -0.99
HSPG2-213ENST00000498495 ASIPP42127 132 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
HSPG2-213ENST00000498495 ZNF674Q2M3X9 581 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 BAGE2Q86Y30 109 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 NHLRC2Q8NBF2 726 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 TXNDC17Q9BRA2 123 aa8.88□□□□□ -0.99
HSPG2-213ENST00000498495 PGPEP1LA6NFU8 196 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 KRBOX1C9JBD0 128 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 CIDEAO60543 219 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 IFNA1P01562 189 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 PTH2Q96A98 100 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 Q9H8V8 135 aa8.87□□□□□ -0.99
HSPG2-213ENST00000498495 MUC4Q99102 2169 aa8.86□□□□□ -0.99
HSPG2-213ENST00000498495 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
HSPG2-213ENST00000498495 RS1O15537 224 aa8.86□□□□□ -0.99
HSPG2-213ENST00000498495 Q6ZR54 194 aa8.86□□□□□ -0.99
HSPG2-213ENST00000498495 PCNPQ8WW12 178 aaKnown RBP8.86□□□□□ -0.99
HSPG2-213ENST00000498495 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms