RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 IGHV4-61A0A0C4DH41 118 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 TMEM8BA6NDV4 472 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 SRD5A1P18405 259 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 C19orf54Q5BKX5 351 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 ZMAT4Q9H898 229 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 TMEM160Q9NX00 188 aa12.41□□□□□ -0.42
PCBP4-216ENST00000497390 M0R381 172 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 GNLYP22749 145 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 ARL3P36405 182 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 FXYD2P54710 66 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 SEC11AP67812 179 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 Q8N8P6 123 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 NXT2Q9NPJ8 142 aaKnown RBP12.4□□□□□ -0.42
PCBP4-216ENST00000497390 MRPL35Q9NZE8 188 aaKnown RBP12.4□□□□□ -0.42
PCBP4-216ENST00000497390 K7ERJ3 54 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 SAP30O75446 220 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 RAB9AP51151 201 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 BLCAPP62952 87 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 SPOCK3Q9BQ16 436 aa12.4□□□□□ -0.42
PCBP4-216ENST00000497390 HSD52Q0P140 79 aa12.39□□□□□ -0.43
PCBP4-216ENST00000497390 OCIAD2Q56VL3 154 aa12.39□□□□□ -0.43
PCBP4-216ENST00000497390 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
PCBP4-216ENST00000497390 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
PCBP4-216ENST00000497390 RPL39LQ96EH5 51 aaKnown RBP12.39□□□□□ -0.43
PCBP4-216ENST00000497390 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
PCBP4-216ENST00000497390 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
PCBP4-216ENST00000497390 IGKCP01834 107 aa12.38□□□□□ -0.43
PCBP4-216ENST00000497390 RPL11P62913 178 aaKnown RBP12.38□□□□□ -0.43
PCBP4-216ENST00000497390 C9orf118A6NHY6 69 aa12.38□□□□□ -0.43
PCBP4-216ENST00000497390 GCSHP23434 173 aa12.38□□□□□ -0.43
PCBP4-216ENST00000497390 CDKN1BP46527 198 aa12.38□□□□□ -0.43
PCBP4-216ENST00000497390 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 A0A0G2JLM5 398 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 OR9G4Q8NGQ1 327 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 GNRH2O43555 120 aa12.37□□□□□ -0.43
PCBP4-216ENST00000497390 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
PCBP4-216ENST00000497390 IGHV1-69DA0A0B4J2H0 117 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 H3BRM9 83 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 IGHV1-69P01742 117 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 TMEM95Q3KNT9 176 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 FBN2P35556 2912 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 PIEZO1Q92508 2521 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 SOCS3O14543 225 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 S100A7P31151 101 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 LAGE3Q14657 143 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 NPFFR1Q9GZQ6 430 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 MYO18BQ8IUG5 2567 aa12.36□□□□□ -0.43
PCBP4-216ENST00000497390 H3BUX3 64 aa12.35□□□□□ -0.43
PCBP4-216ENST00000497390 ANXA2RQ3ZCQ2 193 aa12.35□□□□□ -0.43
PCBP4-216ENST00000497390 A6NDN8 102 aa12.35□□□□□ -0.43
PCBP4-216ENST00000497390 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
PCBP4-216ENST00000497390 RASL10AQ92737 203 aa12.35□□□□□ -0.43
PCBP4-216ENST00000497390 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
PCBP4-216ENST00000497390 DPM2O94777 84 aa12.34□□□□□ -0.43
PCBP4-216ENST00000497390 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
PCBP4-216ENST00000497390 SIVA1O15304 175 aa12.33□□□□□ -0.43
PCBP4-216ENST00000497390 MRPL53Q96EL3 112 aaKnown RBP12.33□□□□□ -0.43
PCBP4-216ENST00000497390 RNF223E7ERA6 249 aa12.33□□□□□ -0.44
PCBP4-216ENST00000497390 AVPP01185 164 aa12.33□□□□□ -0.44
PCBP4-216ENST00000497390 PF4V1P10720 104 aa12.33□□□□□ -0.44
PCBP4-216ENST00000497390 C10orf99Q6UWK7 81 aa12.33□□□□□ -0.44
PCBP4-216ENST00000497390 HIF1ANQ9NWT6 349 aa12.33□□□□□ -0.44
PCBP4-216ENST00000497390 IGHV4-4A0A075B6R2 117 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 C9orf139Q6ZV77 190 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 NRGNQ92686 78 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 AP1S3Q96PC3 154 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 JPT2Q9H910 190 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 CREBBPQ92793 2442 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 FAM223BA6NKX1 122 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 MGPP08493 103 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 FAM223AQ8IWN6 122 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 ZFYVE26Q68DK2 2539 aa12.32□□□□□ -0.44
PCBP4-216ENST00000497390 ZNF469Q96JG9 3925 aaPredicted RBP12.32□□□□□ -0.44
PCBP4-216ENST00000497390 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
PCBP4-216ENST00000497390 S100A4P26447 101 aaKnown RBP12.31□□□□□ -0.44
PCBP4-216ENST00000497390 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
PCBP4-216ENST00000497390 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
PCBP4-216ENST00000497390 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
PCBP4-216ENST00000497390 K7EP34 96 aa12.31□□□□□ -0.44
PCBP4-216ENST00000497390 A0A1W2PPM0 123 aa12.3□□□□□ -0.44
PCBP4-216ENST00000497390 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
PCBP4-216ENST00000497390 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
PCBP4-216ENST00000497390 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
PCBP4-216ENST00000497390 DOPEY1Q5JWR5 2465 aa12.3□□□□□ -0.44
PCBP4-216ENST00000497390 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
PCBP4-216ENST00000497390 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
PCBP4-216ENST00000497390 A0A087WX48 190 aa12.29□□□□□ -0.44
PCBP4-216ENST00000497390 PRSS47A8MTI9 375 aa12.29□□□□□ -0.44
PCBP4-216ENST00000497390 NDUFA4O00483 81 aa12.29□□□□□ -0.44
PCBP4-216ENST00000497390 ATP5LO75964 103 aa12.29□□□□□ -0.44
PCBP4-216ENST00000497390 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCBP4-216ENST00000497390 PHLDA3Q9Y5J5 127 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms