RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 RPL18Q07020 188 aaKnown RBP2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 ZNF141Q15928 474 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 C6orf52Q5T4I8 152 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 TMEM14EPQ6UXP3 125 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 SAXO1Q8IYX7 474 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 OR51A4Q8NGJ6 313 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 TERB2Q8NHR7 220 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 ARL11Q969Q4 196 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 TCEAL7Q9BRU2 100 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 CBLN4Q9NTU7 201 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 NAT8Q9UHE5 227 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 GNG8Q9UK08 70 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 HS3ST2Q9Y278 367 aa2.31□□□□□ -2.04
EXOSC3-208ENST00000496910 IGKV1D-37A0A075B6S9 117 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 TXNDC9O14530 226 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 LY6HO94772 140 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 NAPSAO96009 420 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 C1QAP02745 245 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 IGLC6P0CF74 106 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 SMIM6P0DI80 62 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 CRHBPP24387 322 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 WNT4P56705 351 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 TAS2R20P59543 309 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 RHOGP84095 191 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 C3orf62Q6ZUJ4 267 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 ZNF767PQ75MW2 155 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 C3orf22Q8N5N4 141 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 CNEP1R1Q8N9A8 125 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 OR8D4Q8NGM9 314 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 MRPL32Q9BYC8 188 aaKnown RBP2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 SLC39A9Q9NUM3 307 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 MCTS1Q9ULC4 181 aaKnown RBP2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 HEY1Q9Y5J3 304 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 MYH7P12883 1935 aa2.3□□□□□ -2.04
EXOSC3-208ENST00000496910 MYOFQ9NZM1 2061 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 IRGMA1A4Y4 181 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 TMEM212A6NML5 194 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 IGHV1-69P01742 117 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 PAEPP09466 180 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 TSPAN19P0C672 248 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 FABP2P12104 132 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 AZU1P20160 251 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 SDC2P34741 201 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 TMBIM6P55061 237 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 ARPP19P56211 112 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 BIKQ13323 160 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 UBE2SQ16763 222 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 CCSMST1Q4G0I0 132 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 AMMECR1LQ6DCA0 310 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 ZNF322Q6U7Q0 402 aaPredicted RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 SCIMPQ6UWF3 145 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 SDIM1Q6ZPB5 146 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 LINC00305Q7Z4B0 112 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 BPIFA4PQ86YQ2 179 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 ZNF695Q8IW36 515 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 MSRB3Q8IXL7 192 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 RNF175Q8N4F7 328 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 TEX29Q8N6K0 151 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 AP1S3Q96PC3 154 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 BAIAP2Q9UQB8 552 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 U3KQA8 63 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
EXOSC3-208ENST00000496910 A0A087X0T9 212 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 LOC100130705A0A1B0GUX0 176 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 C17orf51A8MQB3 221 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 A8MWP6 167 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 F6UZH7 168 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 K7ERJ3 54 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 TP53I11O14683 189 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 CST7O76096 145 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 SRP14P37108 136 aaKnown RBP2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 RBP2P50120 134 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 DYNLT3P51808 116 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 FXYD7P58549 80 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 UBE2BP63146 152 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 EIF5AP63241 154 aaKnown RBP2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 TAF9Q16594 264 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 RNASE10Q5GAN6 216 aaKnown RBP2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 SPANXN3Q5MJ09 141 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 LDLRAD2Q5SZI1 272 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 BCL2L15Q5TBC7 163 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 PHF5AQ7RTV0 110 aaKnown RBP2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 OR4E2Q8NGC2 313 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 CLDND2Q8NHS1 167 aa2.28□□□□□ -2.04
EXOSC3-208ENST00000496910 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms