RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ID1P41134 155 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 APRG1Q8IVJ8 170 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 USP9YO00507 2555 aaPredicted RBP9.85□□□□□ -0.83
GARNL3-220ENST00000496711 hDV102S1A0JD36 115 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 EVI2AP22794 236 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 BATFQ16520 125 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 ZNF702PQ9H963 129 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
GARNL3-220ENST00000496711 HOXA3O43365 443 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-220ENST00000496711 GAS8-AS1O95177 125 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 ELANEP08246 267 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 LGALS1P09382 135 aaKnown RBP9.84□□□□□ -0.83
GARNL3-220ENST00000496711 SRD5A1P18405 259 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 DCANP1Q8TF63 244 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 MCRIP2Q9BUT9 160 aaKnown RBP9.84□□□□□ -0.83
GARNL3-220ENST00000496711 MRPS16Q9Y3D3 137 aaKnown RBP9.84□□□□□ -0.83
GARNL3-220ENST00000496711 SELENOKQ9Y6D0 94 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 CSMD2Q7Z408 3487 aa9.84□□□□□ -0.83
GARNL3-220ENST00000496711 PTPN13Q12923 2485 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 ASIPP42127 132 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 Q96MF0 132 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
GARNL3-220ENST00000496711 FXYD7P58549 80 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 MS4A6AQ9H2W1 248 aa9.83□□□□□ -0.84
GARNL3-220ENST00000496711 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-220ENST00000496711 S100A4P26447 101 aaKnown RBP9.82□□□□□ -0.84
GARNL3-220ENST00000496711 ANXA2RQ3ZCQ2 193 aa9.82□□□□□ -0.84
GARNL3-220ENST00000496711 OR2K2Q8NGT1 345 aa9.82□□□□□ -0.84
GARNL3-220ENST00000496711 LGALS9BQ3B8N2 356 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 Q8N8P6 123 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 IFI27L1Q96BM0 104 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 SCRT2Q9NQ03 307 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 IGHV4OR15-8A0A075B7B6 117 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 A0A087WW49 117 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 KLLNB2CW77 178 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 LGALS9O00182 355 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 TCAPO15273 167 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 COL5A1-AS1Q5SY13 56 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 KRTAP1-3Q8IUG1 177 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 NRACQ8N912 160 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 MRAP2Q96G30 205 aa9.81□□□□□ -0.84
GARNL3-220ENST00000496711 ZANQ9Y493 2812 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 TRAV26-2A0A0B4J265 109 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 M0R381 172 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 FCER1GP30273 86 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 LEPP41159 167 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 SLC25A34Q6PIV7 304 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 GOLT1BQ9Y3E0 138 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 PHLDA3Q9Y5J5 127 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 CENPEQ02224 2701 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 CREBBPQ92793 2442 aa9.8□□□□□ -0.84
GARNL3-220ENST00000496711 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 IGLV2-18A0A075B6J9 118 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 EPG5Q9HCE0 2579 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-220ENST00000496711 TFPI2P48307 235 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
GARNL3-220ENST00000496711 PSMG4Q5JS54 123 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 ODF3Q96PU9 254 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
GARNL3-220ENST00000496711 K7EQG2 157 aa9.78□□□□□ -0.84
GARNL3-220ENST00000496711 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
GARNL3-220ENST00000496711 Q8N2B8 174 aa9.78□□□□□ -0.84
GARNL3-220ENST00000496711 DPF1Q92782 380 aa9.78□□□□□ -0.84
GARNL3-220ENST00000496711 DOPEY2Q9Y3R5 2298 aa9.78□□□□□ -0.84
GARNL3-220ENST00000496711 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
GARNL3-220ENST00000496711 HINT1P49773 126 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-220ENST00000496711 STPG4Q8N801 248 aa9.77□□□□□ -0.85
GARNL3-220ENST00000496711 AP1S3Q96PC3 154 aa9.77□□□□□ -0.85
GARNL3-220ENST00000496711 GNRH2O43555 120 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 NXPH4O95158 308 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 TMEM158Q8WZ71 300 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 MUC4Q99102 2169 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 A0A0J9YX75 114 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 C7orf71A4D174 169 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 SPRY2O43597 315 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 COX8AP10176 69 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 LAGE3Q14657 143 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
GARNL3-220ENST00000496711 C14orf178Q8N769 122 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-220ENST00000496711 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
GARNL3-220ENST00000496711 CD5LO43866 347 aa9.74□□□□□ -0.85
GARNL3-220ENST00000496711 MGPP08493 103 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 460.3 ms