RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 C11orf52Q96A22 123 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 RNF183Q96D59 192 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 PRADC1Q9BSG0 188 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 DEFB130BP0DP73 79 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 DEFB130AP0DP74 79 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 CRISP2P16562 243 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 UBE2DNLQ8IWF7 75 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 ANK2Q01484 3957 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 TRAV8-1A0A0A6YYK1 113 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 SOCS3O14543 225 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
U2AF1-212ENST00000496462 ATP5G1P05496 136 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 RPP21Q9H633 154 aaKnown RBP6.37□□□□□ -1.39
U2AF1-212ENST00000496462 K7EIL1 84 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 FER1L6-AS1Q8NA97 138 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 AP1S3Q96PC3 154 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 CTDSP1Q9GZU7 261 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 RPS10P5Q9NQ39 176 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 SH2D1AO60880 128 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 SRP19P09132 144 aaKnown RBP6.37□□□□□ -1.39
U2AF1-212ENST00000496462 GFI1BQ5VTD9 330 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
U2AF1-212ENST00000496462 A0A1B0GW15 77 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 A8MWV9 139 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 PRAC2D3DTV9 90 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 BTN1A1Q13410 526 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 FAM24BQ8N5W8 94 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 NHLRC2Q8NBF2 726 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 F5H768 121 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 PPP1R17O96001 155 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 OSTCQ9NRP0 149 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 SSTP61278 116 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 C21orf62-AS1Q17RA5 79 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 LINC00469Q8N7U9 141 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 ZNF503Q96F45 646 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 C19orf73Q9NVV2 129 aa6.36□□□□□ -1.39
U2AF1-212ENST00000496462 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 M0R2P5 195 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 AZU1P20160 251 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 SH2D6Q7Z4S9 175 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 MGPP08493 103 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 Q8N1Y9 231 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 M0R381 172 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 TWIST1Q15672 202 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 SEC11CQ9BY50 192 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
U2AF1-212ENST00000496462 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GRIFINA4D1Z8 144 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 LTAP01374 205 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 ZNF56Q15929 161 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 ZNF124Q15973 351 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GAGE12BA1L429 117 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 TMEM218A2RU14 115 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 SCO1O75880 301 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GAGE7O76087 117 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 CXCL1P09341 107 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GAGE12FP0CL80 117 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GAGE12GP0CL81 117 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 GAGE12IP0CL82 117 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 NOP10Q9NPE3 64 aaKnown RBP6.34□□□□□ -1.39
U2AF1-212ENST00000496462 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.39
U2AF1-212ENST00000496462 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.39
U2AF1-212ENST00000496462 NUPR2A6NF83 97 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.39
U2AF1-212ENST00000496462 ZNF876PQ49A33 203 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 C2CD4CQ8TF44 421 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 NDUFAF3Q9BU61 184 aa6.34□□□□□ -1.39
U2AF1-212ENST00000496462 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 H3BVH4 76 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 IGHV4-28A0A0C4DH34 117 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 LGALS9BQ3B8N2 356 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 FAM74A4Q5TZK3 123 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 GSN-AS1Q9NRJ2 163 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 MED14OSP0DP75 135 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 PKIAP61925 76 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 CT83Q5H943 113 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 DEFB1P60022 68 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 LINC00479Q96M42 142 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
U2AF1-212ENST00000496462 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 FAM231BA6NCW3 169 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 KLLNB2CW77 178 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 ARMS2P0C7Q2 107 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 TMEM97Q5BJF2 176 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 RPL36AP83881 106 aaKnown RBP6.32□□□□□ -1.4
U2AF1-212ENST00000496462 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 RPL36ALQ969Q0 106 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms