RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 SLC25A16P16260 332 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 Q6ZQT7 251 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 LCNL1Q6ZST4 164 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 DPF1Q92782 380 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 COX8AP10176 69 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 EVI2AP22794 236 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
CALD1-222ENST00000495522 SMPXQ9UHP9 88 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 SPANXN1Q5VSR9 72 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 Q6ZVH6 145 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 NRGNQ92686 78 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 GATA1P15976 413 aaPredicted RBP11.64□□□□□ -0.55
CALD1-222ENST00000495522 RHPN1-AS1Q9BWJ2 59 aa11.64□□□□□ -0.55
CALD1-222ENST00000495522 DAZ1Q9NQZ3 744 aaKnown RBP11.64□□□□□ -0.55
CALD1-222ENST00000495522 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 H3BVH4 76 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 FCER1GP30273 86 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 LEPP41159 167 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 LINC01356Q8N9X3 169 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 OR2K2Q8NGT1 345 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
CALD1-222ENST00000495522 USP9XQ93008 2570 aaPredicted RBP11.63□□□□□ -0.55
CALD1-222ENST00000495522 J3KRW8 73 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 Q8N8P6 123 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 OR1N2Q8NGR9 330 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 SPG11Q96JI7 2443 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 NUDT3O95989 172 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 C12orf54Q6X4T0 127 aa11.62□□□□□ -0.55
CALD1-222ENST00000495522 PEF1Q9UBV8 284 aaKnown RBP11.62□□□□□ -0.55
CALD1-222ENST00000495522 K7EMT4 169 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 DEFB1P60022 68 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 FAM19A4Q96LR4 140 aa11.61□□□□□ -0.55
CALD1-222ENST00000495522 MAP1AP78559 2803 aaPredicted RBP11.6□□□□□ -0.55
CALD1-222ENST00000495522 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 TRBV7-9A0A0J9YWB2 115 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 A0A1B0GV72 72 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 DEFB125Q8N687 156 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 NRACQ8N912 160 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 C18orf15Q96N68 181 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 J3QLI3 93 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 MRAP2Q96G30 205 aa11.6□□□□□ -0.55
CALD1-222ENST00000495522 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.557e-6■■■□□ 17.4
CALD1-222ENST00000495522 TRAV26-2A0A0B4J265 109 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 PSMB8P28062 276 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 ASIPP42127 132 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 SRSF1Q07955 248 aaKnown RBP eCLIP11.59□□□□□ -0.556e-8■■■■□ 19.9
CALD1-222ENST00000495522 APRG1Q8IVJ8 170 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 TMEM158Q8WZ71 300 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
CALD1-222ENST00000495522 A0A096LNT2 108 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 F6UB75 175 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
CALD1-222ENST00000495522 RNASE4P34096 147 aaKnown RBP11.58□□□□□ -0.56
CALD1-222ENST00000495522 C2orf91Q6ZV80 131 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 FGF6P10767 208 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 SAMD13Q5VXD3 122 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 DKK2Q9UBU2 259 aa11.58□□□□□ -0.56
CALD1-222ENST00000495522 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.56
CALD1-222ENST00000495522 CRYBG3Q68DQ2 2970 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 G3V4G9 280 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 MED14OSP0DP75 135 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 ID1P41134 155 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 UTP20O75691 2785 aaKnown RBP11.57□□□□□ -0.56
CALD1-222ENST00000495522 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 M0R381 172 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 COX6B1P14854 86 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 SCGB2A2Q13296 93 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 LAGE3Q14657 143 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
CALD1-222ENST00000495522 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
CALD1-222ENST00000495522 TGFAP01135 160 aa11.56□□□□□ -0.56
CALD1-222ENST00000495522 SRD5A1P18405 259 aa11.56□□□□□ -0.56
CALD1-222ENST00000495522 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
CALD1-222ENST00000495522 CD5LO43866 347 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 PRSS1P07477 247 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 EDN2P20800 178 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 RIPPLY3P57055 190 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 ODF1Q14990 250 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 WFDC12Q8WWY7 111 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 ATP5LO75964 103 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 SMIM17P0DL12 118 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
CALD1-222ENST00000495522 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms