RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 IQCF2Q8IXL9 164 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 OR4C5Q8NGB2 326 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 RASL10AQ92737 203 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 SPXQ9BT56 116 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 CCDC32Q9BV29 185 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 SMIM3Q9BZL3 60 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 KCNIP2Q9NS61 270 aa8.51□□□□□ -1.05
SKA1-205ENST00000494518 C9JCJ5 164 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 C17orf112F2Z3M2 114 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 PSCAO43653 123 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 PPT1P50897 306 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 Q9HAA7 133 aa8.5□□□□□ -1.05
SKA1-205ENST00000494518 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 TYMSP04818 313 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 GNG5P63218 68 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 ATP5SQ99766 215 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 NMES1Q9C002 83 aa8.49□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-73A0A0B4J1V6 119 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 PGPA6NDG6 321 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 M0R2P5 195 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 HMGB3O15347 200 aaKnown RBP8.48□□□□□ -1.05
SKA1-205ENST00000494518 ASAH1Q13510 395 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 CMTM2Q8TAZ6 248 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 TVP23CQ96ET8 276 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 SGK494Q96LW2 274 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 MBD2Q9UBB5 411 aa8.48□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 LRCOL1A6NCL2 159 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-30P01768 117 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 IGHV3-30-5P0DP03 117 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 GATA1P15976 413 aaPredicted RBP8.47□□□□□ -1.05
SKA1-205ENST00000494518 TAS2R45P59539 299 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 TDRG1Q3Y452 100 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 SCGB1C1Q8TD33 95 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 PPP1R1CQ8WVI7 109 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 OTORQ9NRC9 128 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 LENEPQ9Y5L5 61 aa8.47□□□□□ -1.05
SKA1-205ENST00000494518 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.06
SKA1-205ENST00000494518 K7EP13 123 aa8.46□□□□□ -1.06
SKA1-205ENST00000494518 H2BFSP57053 126 aa8.46□□□□□ -1.06
SKA1-205ENST00000494518 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.06
SKA1-205ENST00000494518 TREM1Q9NP99 234 aa8.46□□□□□ -1.06
SKA1-205ENST00000494518 FBLL1A6NHQ2 334 aaKnown RBP8.45□□□□□ -1.06
SKA1-205ENST00000494518 RAB2AP61019 212 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 LINC01556Q5JQF7 62 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 Q6ZSN1 163 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 TMED6Q8WW62 240 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 ASB13Q8WXK3 278 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 WFDC1Q9HC57 220 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
SKA1-205ENST00000494518 TRAV8-6A0A0B4J262 113 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 INMT-MINDY4F8WBC2 141 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 MPC2O95563 127 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 RPL12P30050 165 aaKnown RBP8.44□□□□□ -1.06
SKA1-205ENST00000494518 CYCSP99999 105 aaKnown RBP8.44□□□□□ -1.06
SKA1-205ENST00000494518 ZNF876PQ49A33 203 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 Q8N814 137 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 TMEM75Q8N9X5 138 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 C11orf21Q9P2W6 132 aa8.44□□□□□ -1.06
SKA1-205ENST00000494518 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 LECT2O14960 151 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 SSNA1O43805 119 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 ZNF80P51504 273 aaPredicted RBP8.43□□□□□ -1.06
SKA1-205ENST00000494518 TIRAPP58753 221 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 IFITM3Q01628 133 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 WFDC2Q14508 124 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
SKA1-205ENST00000494518 CFAP126Q5VTH2 177 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 NTN5Q8WTR8 489 aaPredicted RBP8.43□□□□□ -1.06
SKA1-205ENST00000494518 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 NDUFA13Q9P0J0 144 aa8.43□□□□□ -1.06
SKA1-205ENST00000494518 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 RS1O15537 224 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 UPK1BO75841 260 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 PFN1P07737 140 aaKnown RBP8.42□□□□□ -1.06
SKA1-205ENST00000494518 RHOHQ15669 191 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 PQLC2Q6ZP29 291 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 S100ZQ8WXG8 99 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 KCNS1Q96KK3 526 aa8.42□□□□□ -1.06
SKA1-205ENST00000494518 GCGP01275 180 aa8.41□□□□□ -1.06
SKA1-205ENST00000494518 ARL14EPLP0DKL9 152 aa8.41□□□□□ -1.06
SKA1-205ENST00000494518 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
SKA1-205ENST00000494518 LELP1Q5T871 98 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms