RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 GOLT1AQ6ZVE7 132 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 IQCF2Q8IXL9 164 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
UBR4-216ENST00000494503 ATP5SQ99766 215 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
UBR4-216ENST00000494503 SDF2L1Q9HCN8 221 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 OR5AC2Q9NZP5 309 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
UBR4-216ENST00000494503 Q8N814 137 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 ENKURQ8TC29 256 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 ASB13Q8WXK3 278 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 TMEM70Q9BUB7 260 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 SMIM3Q9BZL3 60 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 FAT1Q14517 4588 aa6.47□□□□□ -1.37
UBR4-216ENST00000494503 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.46□□□□□ -1.38
UBR4-216ENST00000494503 TRAV8-1A0A0A6YYK1 113 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 PGPA6NDG6 321 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 LECT2O14960 151 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 TYMSP04818 313 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 PFN1P07737 140 aaKnown RBP6.46□□□□□ -1.38
UBR4-216ENST00000494503 LINC01556Q5JQF7 62 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 TREM1Q9NP99 234 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 MBD2Q9UBB5 411 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 LENEPQ9Y5L5 61 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
UBR4-216ENST00000494503 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 LRCOL1A6NCL2 159 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 IBA57-AS1B1ANH7 110 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 HMGB3O15347 200 aaKnown RBP6.45□□□□□ -1.38
UBR4-216ENST00000494503 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
UBR4-216ENST00000494503 GATA1P15976 413 aaPredicted RBP6.45□□□□□ -1.38
UBR4-216ENST00000494503 GNG5P63218 68 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 IL15RAQ13261 267 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 RHOHQ15669 191 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 CCDC32Q9BV29 185 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 OTORQ9NRC9 128 aa6.45□□□□□ -1.38
UBR4-216ENST00000494503 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
UBR4-216ENST00000494503 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
UBR4-216ENST00000494503 TM2D2Q9BX73 214 aa6.44□□□□□ -1.38
UBR4-216ENST00000494503 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
UBR4-216ENST00000494503 SSNA1O43805 119 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 PET100P0DJ07 73 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 CYCSP99999 105 aaKnown RBP6.43□□□□□ -1.38
UBR4-216ENST00000494503 ACOT6Q3I5F7 207 aaPredicted RBP6.43□□□□□ -1.38
UBR4-216ENST00000494503 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 LELP1Q5T871 98 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 ATP6V0E2Q8NHE4 81 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 PPP1R1CQ8WVI7 109 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 TMED6Q8WW62 240 aa6.43□□□□□ -1.38
UBR4-216ENST00000494503 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 H0YIZ8 118 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 K7EQM0 130 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 TIRAPP58753 221 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 RAB2AP61019 212 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 GAGE1Q13065 139 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 GAGE4Q13068 117 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 GAGE5Q13069 117 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 LINC01620Q4KN68 170 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 PQLC2Q6ZP29 291 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 Q8N3U1 123 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 TMEM75Q8N9X5 138 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 GTSF1LQ9H1H1 148 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 HSPB11Q9Y547 144 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 URGCP-MRPS24S4R325 110 aa6.42□□□□□ -1.38
UBR4-216ENST00000494503 TRBV6-4A0A1B0GX49 114 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 GCGP01275 180 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
UBR4-216ENST00000494503 S100A4P26447 101 aaKnown RBP6.41□□□□□ -1.38
UBR4-216ENST00000494503 RPL12P30050 165 aaKnown RBP6.41□□□□□ -1.38
UBR4-216ENST00000494503 WFDC2Q14508 124 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 LGALSLQ3ZCW2 172 aaPredicted RBP6.41□□□□□ -1.38
UBR4-216ENST00000494503 ZNF506Q5JVG8 444 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 DPPA3Q6W0C5 159 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 OR10G9Q8NGN4 311 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 OR10G7Q8NGN6 311 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
UBR4-216ENST00000494503 TRAV8-3A0A0A6YYJ7 113 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 RBFOX3A6NFN3 312 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 GGTLC3B5MD39 225 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 TAAR5O14804 337 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 RS1O15537 224 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 ARL14EPLP0DKL9 152 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 ASAH1Q13510 395 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 LAGE3Q14657 143 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 TOR2AQ5JU69 321 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 OR2T35Q8NGX2 323 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 BAALCQ8WXS3 180 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 SH3BGRL3Q9H299 93 aa6.4□□□□□ -1.38
UBR4-216ENST00000494503 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms