RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RPL39P5Q59GN2 51 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF497Q6ZNH5 498 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 PRSS2P07478 247 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 GRPP07492 148 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 RHOHQ15669 191 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 C20orf173Q96LM9 149 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 FOXB1Q99853 325 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 SHANK2-AS3Q9BTD1 123 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 OTORQ9NRC9 128 aa5.34□□□□□ -1.55
VPS13B-205ENST00000493587 ZFHX3Q15911 3703 aa5.34□□□□□ -1.56
VPS13B-205ENST00000493587 A0A096LPE4 126 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 A0A1W2PPZ6 126 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 CCL21O00585 134 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 SPRY2O43597 315 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 EBI3Q14213 229 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 C10orf128Q5T292 105 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 Q8N8P6 123 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 TMEM243Q9BU79 118 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 ARRDC1-AS1Q9H2J1 176 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 C15orf61A6NNL5 157 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 HOXA4Q00056 320 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-205ENST00000493587 LINC00311Q8N616 119 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 NCOR1O75376 2440 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 TRGV8A0A0C4DH27 118 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 LINC01619G3V211 115 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 LYZL6O75951 148 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 NDUFC2O95298 119 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 ERHP84090 104 aaKnown RBP5.33□□□□□ -1.56
VPS13B-205ENST00000493587 LAGE3Q14657 143 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 Q71RC1 249 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-205ENST00000493587 RITA1Q96K30 269 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 DPH3P1Q9H4G8 78 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 METRNQ9UJH8 293 aa5.33□□□□□ -1.56
VPS13B-205ENST00000493587 FAM240AA0A1B0GVK7 77 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 IGHG3P01860 377 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
VPS13B-205ENST00000493587 BOD1L1Q8NFC6 3051 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 CD69Q07108 199 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 VMA21Q3ZAQ7 101 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 CXorf67Q86X51 503 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-205ENST00000493587 FGF23Q9GZV9 251 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-205ENST00000493587 IGHV3-21A0A0B4J1V1 117 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 J3QT63 122 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 IGHV3-33P01772 117 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 ACYP1P07311 99 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 CCL8P80075 99 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 LINC01561Q8N1V8 128 aa5.32□□□□□ -1.56
VPS13B-205ENST00000493587 H3BT86 120 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 TFF1P04155 84 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 LYZP61626 148 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 ERCC8Q13216 396 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 CLEC2BQ92478 149 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 DCTN5Q9BTE1 182 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 AKAP13Q12802 2813 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 IGKV3D-7A0A0C4DH55 119 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 NBR2O15453 112 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 GAS8-AS1O95177 125 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 ZNF134P52741 427 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 CD177Q8N6Q3 437 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 MDS2Q8NDY4 140 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 ZNF714Q96N38 554 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 H7C423 109 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 ELANEP08246 267 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 RNASE2P10153 161 aaKnown RBP5.31□□□□□ -1.56
VPS13B-205ENST00000493587 SUB1P53999 127 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS13B-205ENST00000493587 PATE2Q6UY27 113 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 SDIM1Q6ZPB5 146 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 GGNQ86UU5 652 aa5.31□□□□□ -1.56
VPS13B-205ENST00000493587 TTC28Q96AY4 2481 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 A0A0J9YY99 117 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 IQCF6A8MYZ5 107 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 Q6ZS46 218 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 U3KQK5 164 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 ATMQ13315 3056 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 UPK2O00526 184 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 PSPNO60542 156 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 HIST1H4AP62805 103 aaKnown RBP5.3□□□□□ -1.56
VPS13B-205ENST00000493587 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
VPS13B-205ENST00000493587 CDSNQ15517 529 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 LEAP2Q969E1 77 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 C8orf49Q96NF6 230 aa5.3□□□□□ -1.56
VPS13B-205ENST00000493587 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-205ENST00000493587 A0A0B4J2C4 111 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 TRIAP1O43715 76 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 CCL3P10147 92 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 KALRNO60229 2985 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 P0DMU3 169 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 FAM231AP0DMU4 169 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 FAM231CP0DMU5 169 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 PLGLAQ15195 96 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 C17orf77Q96MU5 243 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 OTOGLQ3ZCN5 2332 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 IGHV3-64A0A075B6Q5 118 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 KNCNA6PVL3 124 aa5.29□□□□□ -1.56
VPS13B-205ENST00000493587 IGHV3-30P01768 117 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms