RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 NAGKQ9UJ70 344 aa7.91□□□□□ -1.14
COL6A3-213ENST00000493475 A0A087WTM6 91 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 TRAV4A0A0B4J268 109 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 TRAV21A0A0B4J279 112 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 M0R2P5 195 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 CIDEAO60543 219 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 CRYGDP07320 174 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 ASAH1Q13510 395 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 NHLRC2Q8NBF2 726 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 PHYHIPLQ96FC7 376 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 HYLS1Q96M11 299 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 SDF2L1Q9HCN8 221 aa7.9□□□□□ -1.14
COL6A3-213ENST00000493475 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.15
COL6A3-213ENST00000493475 A0A1W2PPV4 95 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 K7EQM0 130 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
COL6A3-213ENST00000493475 DNAH10OSP0CZ25 163 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 INAFM2P0DMQ5 153 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 FFAR4Q5NUL3 377 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 PRR9Q5T870 116 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 ARL6IP6Q8N6S5 226 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 OTORQ9NRC9 128 aa7.89□□□□□ -1.15
COL6A3-213ENST00000493475 SERTM2A0A1B0GWG4 89 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 DIRC3C9JPN6 131 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 SFTA3P0C7M3 94 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 GCSHP23434 173 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 ACOT6Q3I5F7 207 aaPredicted RBP7.88□□□□□ -1.15
COL6A3-213ENST00000493475 TDRG1Q3Y452 100 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
COL6A3-213ENST00000493475 ZNF479Q96JC4 524 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 MDFICQ9P1T7 246 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 RPH3ALQ9UNE2 315 aa7.88□□□□□ -1.15
COL6A3-213ENST00000493475 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-213ENST00000493475 IGHV3-38A0A0C4DH36 116 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 SSNA1O43805 119 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 TIRAPP58753 221 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 ZFP69Q49AA0 526 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 ASB13Q8WXK3 278 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 TREM1Q9NP99 234 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 OR5AC2Q9NZP5 309 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 MBD2Q9UBB5 411 aa7.87□□□□□ -1.15
COL6A3-213ENST00000493475 IGLV5-52A0A0A0MRZ9 124 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 PGPA6NDG6 321 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
COL6A3-213ENST00000493475 DEFA1P59665 94 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 DEFA3P59666 94 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 RHOHQ15669 191 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 OR10J3Q5JRS4 329 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 Q5VSD8 79 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 PPP1R1CQ8WVI7 109 aa7.86□□□□□ -1.15
COL6A3-213ENST00000493475 INMT-MINDY4F8WBC2 141 aa7.85□□□□□ -1.15
COL6A3-213ENST00000493475 SIX6O95475 246 aa7.85□□□□□ -1.15
COL6A3-213ENST00000493475 RPL12P30050 165 aaKnown RBP7.85□□□□□ -1.15
COL6A3-213ENST00000493475 GOLT1AQ6ZVE7 132 aa7.85□□□□□ -1.15
COL6A3-213ENST00000493475 TM2D2Q9BX73 214 aa7.85□□□□□ -1.15
COL6A3-213ENST00000493475 HSPB11Q9Y547 144 aa7.85□□□□□ -1.15
COL6A3-213ENST00000493475 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 TAAR5O14804 337 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 UPK1BO75841 260 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 ZNF876PQ49A33 203 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 LINC01556Q5JQF7 62 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 TMEM70Q9BUB7 260 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 TNFRSF18Q9Y5U5 241 aa7.84□□□□□ -1.15
COL6A3-213ENST00000493475 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
COL6A3-213ENST00000493475 TRBV6-4A0A1B0GX49 114 aa7.83□□□□□ -1.16
COL6A3-213ENST00000493475 MPC2O95563 127 aa7.83□□□□□ -1.16
COL6A3-213ENST00000493475 TOR2AQ5JU69 321 aa7.83□□□□□ -1.16
COL6A3-213ENST00000493475 Q6ZQT7 251 aa7.83□□□□□ -1.16
COL6A3-213ENST00000493475 SMIM3Q9BZL3 60 aa7.83□□□□□ -1.16
COL6A3-213ENST00000493475 F6UZH7 168 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 GNRH2O43555 120 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 MBP02144 154 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 TYMSP04818 313 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 SEC11BP0C7V7 166 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 MGST1P10620 155 aaKnown RBP7.82□□□□□ -1.16
COL6A3-213ENST00000493475 GATA1P15976 413 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-213ENST00000493475 Q6ZSN1 163 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 OR10G9Q8NGN4 311 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 OR10G7Q8NGN6 311 aa7.82□□□□□ -1.16
COL6A3-213ENST00000493475 IBA57-AS1B1ANH7 110 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 H0YIZ8 118 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
COL6A3-213ENST00000493475 XGP55808 180 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 H2BFSP57053 126 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 KRTAP10-1P60331 282 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 LAGE3Q14657 143 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 SAPCD1Q5SSQ6 148 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 LELP1Q5T871 98 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 Q9HAA7 133 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 COX11Q9Y6N1 276 aa7.81□□□□□ -1.16
COL6A3-213ENST00000493475 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
COL6A3-213ENST00000493475 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
COL6A3-213ENST00000493475 SMUG1Q53HV7 270 aa7.8□□□□□ -1.16
COL6A3-213ENST00000493475 Q8N814 137 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms