RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 RD3LP0DJH9 198 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 HLA-DRB4P13762 266 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 S100GP29377 79 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 EIF2B2P49770 351 aaKnown RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 BTN1A1Q13410 526 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 IAH1Q2TAA2 248 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 TRIQKQ629K1 86 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 CYP2G1PQ6ZSU1 146 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 MIR17HGQ75NE6 70 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 HSD17B13Q7Z5P4 300 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 OR8I2Q8N0Y5 310 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 EXOC3-AS1Q8N2X6 119 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM75Q8N9X5 138 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF738Q8NE65 137 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 COQ8AQ8NI60 647 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 Q8WTZ3 238 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 VSIG2Q96IQ7 327 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 C9orf85Q96MD7 179 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 PRRT1Q99946 306 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 C11orf68Q9H3H3 251 aaKnown RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 PPDPFQ9H3Y8 114 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 SAV1Q9H4B6 383 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 FKBP11Q9NYL4 201 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 PSENENQ9NZ42 101 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 OR5AC2Q9NZP5 309 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 ZMAT5Q9UDW3 170 aaKnown RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 SHPKQ9UHJ6 478 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 HLA-DRB4X5D2U9 266 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 APOBP04114 4563 aaKnown RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 TRAV12-3A0A0B4J271 114 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 KIR2DL5BA0A0G2JN68 375 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 KIR2DL5BA0A0G2JPC4 375 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 LOC100131303A0A0U1RQF7 123 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 C7orf66A4D0T2 115 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 F6UZH7 168 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 INS-IGF2F8WCM5 200 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 AGPAT2O15120 278 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 LYRM1O43325 122 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 ATP5LO75964 103 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 IL5P05113 134 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 OR10J4P0C629 311 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 TBPP20226 339 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 S100A5P33763 92 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 BCAP31P51572 246 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 YPEL3P61236 119 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 GNG5P63218 68 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 ASAH1Q13510 395 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 CLINT1Q14677 625 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 UQCC3Q6UW78 93 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM14EPQ6UXP3 125 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF705AQ6ZN79 300 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 Q6ZTI0 123 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 SSX7Q7RTT5 188 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 UBE2DNLQ8IWF7 75 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 KIR2DL5AQ8N109 375 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 C14orf178Q8N769 122 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 OR52E5Q8NH55 327 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 KIR2DL5BQ8NHK3 375 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 RNASEH2CQ8TDP1 164 aaKnown RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 BLNKQ8WV28 456 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 BORCS5Q969J3 196 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 C16orf74Q96GX8 76 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 DNAJC30Q96LL9 226 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 TRGV9Q99603 122 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 C7orf50Q9BRJ6 194 aaKnown RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 ARV1Q9H2C2 271 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 WFDC1Q9HC57 220 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 MRPL16Q9NX20 251 aaKnown RBP1.9□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF586Q9NXT0 402 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 SCP2D1Q9UJQ7 156 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 TP53TG1Q9Y2A0 90 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
PTCD3-218ENST00000493430 HSPG2P98160 4391 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TRAV8-1A0A0A6YYK1 113 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TRAV10A0A0B4J240 114 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 F5H768 121 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SMLR1H3BR10 107 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 CORTO00230 105 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 CYB5BO43169 146 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 C1QBP02746 253 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TCRBP04435 133 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SFTA3P0C7M3 94 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 CT45A10P0DMU9 189 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SLC25A4P12235 298 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 CXCL3P19876 107 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 FGF7P21781 194 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 NUP62P37198 522 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 INPP1P49441 399 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 PSMB3P49720 205 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 CAV2P51636 162 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SUB1P53999 127 aaKnown RBP eCLIP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 RAB2AP61019 212 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 DAD1P61803 113 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 RHOBP62745 196 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 PAFAH1B2P68402 229 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms