RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SFT2D1Q8WV19 159 aa5.01□□□□□ -1.61
PDLIM1-204ENST00000492511 VSIG2Q96IQ7 327 aa5.01□□□□□ -1.61
PDLIM1-204ENST00000492511 MRPL16Q9NX20 251 aaKnown RBP5.01□□□□□ -1.61
PDLIM1-204ENST00000492511 HERC2O95714 4834 aa5.01□□□□□ -1.61
PDLIM1-204ENST00000492511 TRAV26-1A0A087WT03 109 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 A0A0J9YY99 117 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 PEX7O00628 323 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 PAGE4O60829 102 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 PFDN1O60925 122 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 GCGP01275 180 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 IFNA7P01567 189 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 TYMSP04818 313 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 TPT1P13693 172 aaKnown RBP5□□□□□ -1.61
PDLIM1-204ENST00000492511 CCL20P78556 96 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 ZNF415Q09FC8 603 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 RNF212Q495C1 297 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 DPPA3Q6W0C5 159 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 RASL10AQ92737 203 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 HIST1H2BAQ96A08 127 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 NKX6-2Q9C056 277 aaPredicted RBP5□□□□□ -1.61
PDLIM1-204ENST00000492511 NAGKQ9UJ70 344 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 ARL2-SNX15V9GYD0 113 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 DNAH5Q8TE73 4624 aa5□□□□□ -1.61
PDLIM1-204ENST00000492511 LRP1BQ9NZR2 4599 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 TRGV2A0A075B6R0 118 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 IGKV3D-20A0A0C4DH25 116 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 A0A1B0GV50 99 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 FBLL1A6NHQ2 334 aaKnown RBP4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 K7EQM0 130 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 NUDT3O95989 172 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 IGHV3-53P01767 116 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 PFN1P07737 140 aaKnown RBP4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 H2AFB1P0C5Y9 115 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 EIF5AP63241 154 aaKnown RBP4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 FHL2Q14192 279 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 SMUG1Q53HV7 270 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 SAPCD1Q5SSQ6 148 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 CST9LP1Q5W188 147 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 COX8CQ7Z4L0 72 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 Q86TA4 180 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 AKAP14Q86UN6 197 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 C9orf62Q8N4C0 152 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 SPXQ9BT56 116 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 NDFIP1Q9BT67 221 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 LINC00588Q9Y4M8 146 aa4.99□□□□□ -1.61
PDLIM1-204ENST00000492511 A0A096LPF7 62 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 TRAV1-1A0A0B4J248 108 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 TRBV6-1A0A0K0K1D8 114 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 H3BNG1 76 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 M0R2N4 97 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 LTAP01374 205 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 SFTA3P0C7M3 94 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 RNASE3P12724 160 aaKnown RBP4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 SULT1A2P50226 295 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 ESRGQ1W209 222 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 Q6ZR54 194 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 ZNRF2Q8NHG8 242 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 ZC2HC1AQ96GY0 325 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 ZNF479Q96JC4 524 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 KCNS1Q96KK3 526 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 C9orf85Q96MD7 179 aa4.98□□□□□ -1.61
PDLIM1-204ENST00000492511 IGLV2-18A0A075B6J9 118 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 SCO2A0A1W2PP80 73 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 FABP5P3A8MUU1 101 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 M0R2P5 195 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 PPT1P50897 306 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 RAB5CP51148 216 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 CRYBA4P53673 196 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 UBE2DNLQ8IWF7 75 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 TCEAL7Q9BRU2 100 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 SDF2L1Q9HCN8 221 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 HHLA3Q9XRX5 114 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 RYR1P21817 5038 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
PDLIM1-204ENST00000492511 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 KRBOX1C9JBD0 128 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 RTL8CO15255 209 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 PAX4O43316 350 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 SH2D1AO60880 128 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 FAM3BP58499 235 aaPredicted RBP4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 ZNF674Q2M3X9 581 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 ZFP69Q49AA0 526 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 PTH2Q96A98 100 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 MLST8Q9BVC4 326 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 APOBP04114 4563 aaKnown RBP4.96□□□□□ -1.62
PDLIM1-204ENST00000492511 C9JCJ5 164 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 RS1O15537 224 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 AKR1C3P42330 323 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 NKX2-5P52952 324 aaPredicted RBP4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 CCL18P55774 89 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 UBE2G1P62253 170 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 ZNF876PQ49A33 203 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 ZNF506Q5JVG8 444 aa4.95□□□□□ -1.62
PDLIM1-204ENST00000492511 DNLZQ5SXM8 178 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms