RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 GCGP01275 180 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 AKR1C3P42330 323 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 RAB5CP51148 216 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 TCL1AP56279 114 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 Q6ZQT7 251 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 HIST1H2BAQ96A08 127 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 FAM210BQ96KR6 192 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 C8orf49Q96NF6 230 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 ARL2-SNX15V9GYD0 113 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
SS18L1-205ENST00000492466 OR5I1Q13606 314 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 Q6ZTI0 123 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 Q86TA4 180 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
SS18L1-205ENST00000492466 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
SS18L1-205ENST00000492466 A0A1B0GVG6 124 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 RTL8CO15255 209 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 P0DMU3 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 TCEAL7Q9BRU2 100 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
SS18L1-205ENST00000492466 NUDT3O95989 172 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 IFNA1P01562 189 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 LINC00479Q96M42 142 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
SS18L1-205ENST00000492466 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
SS18L1-205ENST00000492466 SULT1A2P50226 295 aa10.32□□□□□ -0.76
SS18L1-205ENST00000492466 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 SPXQ9BT56 116 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 HSPG2P98160 4391 aa10.31□□□□□ -0.76
SS18L1-205ENST00000492466 A0A0J9YY99 117 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 M0R2N4 97 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 SPINK4O60575 86 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 TYMSP04818 313 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 NKX2-5P52952 324 aaPredicted RBP10.3□□□□□ -0.76
SS18L1-205ENST00000492466 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
SS18L1-205ENST00000492466 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 GNRH2O43555 120 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SS18L1-205ENST00000492466 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 Q6ZR54 194 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 ZFP30Q9Y2G7 519 aa10.29□□□□□ -0.76
SS18L1-205ENST00000492466 IGHV3-16A0A0C4DH30 117 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 ORM1P02763 201 aa10.28□□□□□ -0.76
SS18L1-205ENST00000492466 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
SS18L1-205ENST00000492466 NACAE9PAV3 2078 aa10.27□□□□□ -0.76
SS18L1-205ENST00000492466 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 TRGV4A0A0C4DH28 118 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 M0R2P5 195 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 HOXA5P20719 270 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.77
SS18L1-205ENST00000492466 MUC4Q99102 2169 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 B4DEV8 164 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 C9JCJ5 164 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 M0R036 132 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 SH2D1AO60880 128 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 MED14OSP0DP75 135 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 ASIPP42127 132 aa10.26□□□□□ -0.77
SS18L1-205ENST00000492466 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 LTAP01374 205 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 CCL18P55774 89 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 CCL20P78556 96 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 PCNPQ8WW12 178 aaKnown RBP10.25□□□□□ -0.77
SS18L1-205ENST00000492466 C18orf15Q96N68 181 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 TXNDC17Q9BRA2 123 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
SS18L1-205ENST00000492466 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 TRBV6-1A0A0K0K1D8 114 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 PAX4O43316 350 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 BCL2P10415 239 aa10.24□□□□□ -0.77
SS18L1-205ENST00000492466 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms