RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
USP4-214ENST00000491791 EBLN2Q6P2I7 272 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 ODF3Q96PU9 254 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
USP4-214ENST00000491791 NTF3P20783 257 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 OR8A1Q8NGG7 326 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 OR10J6PQ8NGY7 276 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 DCANP1Q8TF63 244 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 TMEM70Q9BUB7 260 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
USP4-214ENST00000491791 CUBNO60494 3623 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 TMSB15BA0A087X1C1 80 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 TRAV21A0A0B4J279 112 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 SRD5A1P18405 259 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 ID1P41134 155 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 TWIST1Q15672 202 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 PET117Q6UWS5 81 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 C2orf88Q9BSF0 95 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
USP4-214ENST00000491791 ANK3Q12955 4377 aaKnown RBP8.1□□□□□ -1.11
USP4-214ENST00000491791 SYS1-DBNDD2H3BUS1 97 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 LEPROTL1O95214 131 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 TDRG1Q3Y452 100 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 AMN1Q8IY45 258 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 KLHDC1Q8N7A1 406 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 SCRT2Q9NQ03 307 aa8.09□□□□□ -1.11
USP4-214ENST00000491791 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 TRAV2A0A0B4J234 112 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 KLLNB2CW77 178 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 D6R8Y8 96 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 HOXA3O43365 443 aaPredicted RBP8.08□□□□□ -1.12
USP4-214ENST00000491791 TCF21O43680 179 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
USP4-214ENST00000491791 PRB4P10163 310 aaPredicted RBP8.08□□□□□ -1.12
USP4-214ENST00000491791 TMEM95Q3KNT9 176 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 KRTAP24-1Q3LI83 254 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 PRR9Q5T870 116 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 OR10AG1Q8NH19 301 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 ZNF747Q9BV97 191 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 TPPP3Q9BW30 176 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 SIGLEC8Q9NYZ4 499 aa8.08□□□□□ -1.12
USP4-214ENST00000491791 K7EQG2 157 aa8.07□□□□□ -1.12
USP4-214ENST00000491791 NXPH4O95158 308 aa8.07□□□□□ -1.12
USP4-214ENST00000491791 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
USP4-214ENST00000491791 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
USP4-214ENST00000491791 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
USP4-214ENST00000491791 A0A096LNJ9 63 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 M0QZ24 198 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 IGLC3P0DOY3 106 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 CKS2P33552 79 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 LINC01545Q5VT33 79 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 MAP1LC3CQ9BXW4 147 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
USP4-214ENST00000491791 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
USP4-214ENST00000491791 A8MTW9 85 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 NPYP01303 97 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
USP4-214ENST00000491791 SPATA45Q537H7 98 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 SMIM15Q7Z3B0 74 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 DPF1Q92782 380 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 MRAP2Q96G30 205 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 MS4A6AQ9H2W1 248 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 UQCR10Q9UDW1 63 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 PAM16Q9Y3D7 125 aa8.05□□□□□ -1.12
USP4-214ENST00000491791 IGLV2-18A0A075B6J9 118 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 IGHV4OR15-8A0A075B7B6 117 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 A0A087WW49 117 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 M0R143 59 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 HOXD3P31249 432 aaPredicted RBP8.04□□□□□ -1.12
USP4-214ENST00000491791 LEPP41159 167 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 Q8N8P6 123 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 MAP1LC3AQ9H492 121 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
USP4-214ENST00000491791 A0A0J9YX75 114 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 K7EMI3 77 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 M0R381 172 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
USP4-214ENST00000491791 HBDP02042 147 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 CSN3P07498 182 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 ASIPP42127 132 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 SNRPD3P62318 126 aaKnown RBP8.03□□□□□ -1.12
USP4-214ENST00000491791 RPL11P62913 178 aaKnown RBP8.03□□□□□ -1.12
USP4-214ENST00000491791 LGALS9BQ3B8N2 356 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 PRR31Q5SQ13 230 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 LGALS9CQ6DKI2 356 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
USP4-214ENST00000491791 NRACQ8N912 160 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms