RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TYMSP04818 313 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
SMPD4-219ENST00000491128 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
SMPD4-219ENST00000491128 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
SMPD4-219ENST00000491128 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
SMPD4-219ENST00000491128 ZNF256Q9Y2P7 627 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-219ENST00000491128 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 FABP4P15090 132 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 EBLN2Q6P2I7 272 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 NDUFA11Q86Y39 141 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 PRM2P04554 102 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 SLAQ13239 276 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 KRTAP24-1Q3LI83 254 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 MSRB1Q9NZV6 116 aa10.34□□□□□ -0.75
SMPD4-219ENST00000491128 C2orf88Q9BSF0 95 aa10.33□□□□□ -0.76
SMPD4-219ENST00000491128 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
SMPD4-219ENST00000491128 CT83Q5H943 113 aa10.33□□□□□ -0.76
SMPD4-219ENST00000491128 PRIMA1Q86XR5 153 aa10.33□□□□□ -0.76
SMPD4-219ENST00000491128 GNRH2O43555 120 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 CD7P09564 240 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 HTN1P15515 57 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 ODF3L2Q3SX64 289 aa10.32□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
SMPD4-219ENST00000491128 F2Z2F3 143 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
SMPD4-219ENST00000491128 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-219ENST00000491128 PKD1L1Q8TDX9 2849 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 PACRGQ96M98 296 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-219ENST00000491128 HIST1H2BLQ99880 126 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
SMPD4-219ENST00000491128 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 HBBP68871 147 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 TRAV9-1A0A075B6T8 112 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 OR4C46A6NHA9 309 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 H3BVH4 76 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 FOXI2Q6ZQN5 318 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 SPAG8Q99932 426 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-219ENST00000491128 CITED1Q99966 193 aa10.3□□□□□ -0.76
SMPD4-219ENST00000491128 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 NTF3P20783 257 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 OR10AG1Q8NH19 301 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 H3BMM0 161 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 APCSP02743 223 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 TWIST1Q15672 202 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 AMTNQ6UX39 209 aa10.29□□□□□ -0.76
SMPD4-219ENST00000491128 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 KLLNB2CW77 178 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 TCAPO15273 167 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 IGLV1-51P01701 117 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1A1P0DJD3 496 aaKnown RBP10.28□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1CP0DJD4 496 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 RBMY1FQ15415 496 aaKnown RBP10.28□□□□□ -0.76
SMPD4-219ENST00000491128 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 NUPR1O60356 82 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 CRISP2P16562 243 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 SRIP30626 198 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
SMPD4-219ENST00000491128 IGLC6P0CF74 106 aa10.27□□□□□ -0.76
SMPD4-219ENST00000491128 CDKN1BP46527 198 aa10.27□□□□□ -0.76
SMPD4-219ENST00000491128 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.76
SMPD4-219ENST00000491128 IQCJQ1A5X6 159 aa10.27□□□□□ -0.76
SMPD4-219ENST00000491128 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.76
SMPD4-219ENST00000491128 HLA-DRB4P13762 266 aa10.27□□□□□ -0.77
SMPD4-219ENST00000491128 HLA-DRB4X5D2U9 266 aa10.27□□□□□ -0.77
SMPD4-219ENST00000491128 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-219ENST00000491128 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 SIGLEC8Q9NYZ4 499 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 C7orf71A4D174 169 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 OR11H12B2RN74 326 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 S100A4P26447 101 aaKnown RBP10.26□□□□□ -0.77
SMPD4-219ENST00000491128 NUTF2P61970 127 aaKnown RBP10.26□□□□□ -0.77
SMPD4-219ENST00000491128 Q6AWC8 147 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
SMPD4-219ENST00000491128 M0R381 172 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 EREGO14944 169 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 CRXO43186 299 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-219ENST00000491128 HLA-DQA1P01909 254 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 AMBPP02760 352 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 NDUFAF3Q9BU61 184 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
SMPD4-219ENST00000491128 FAM159AQ6UWV7 190 aa10.25□□□□□ -0.77
SMPD4-219ENST00000491128 ATP5L2Q7Z4Y8 100 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms