RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 FXYD2P54710 66 aa10.1□□□□□ -0.79
TNXB-206ENST00000490077 GATD1Q8NB37 220 aa10.1□□□□□ -0.79
TNXB-206ENST00000490077 FOXC2Q99958 501 aa10.1□□□□□ -0.79
TNXB-206ENST00000490077 HHLA3Q9XRX5 114 aa10.1□□□□□ -0.79
TNXB-206ENST00000490077 PRSS1P07477 247 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 EMP1P54849 157 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 PRM2P04554 102 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
TNXB-206ENST00000490077 NPFFO15130 113 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 ADAMTSL5Q6ZMM2 481 aa10.09□□□□□ -0.79
TNXB-206ENST00000490077 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
TNXB-206ENST00000490077 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
TNXB-206ENST00000490077 HIST1H1AQ02539 215 aaPredicted RBP10.08□□□□□ -0.8
TNXB-206ENST00000490077 ODF1Q14990 250 aa10.08□□□□□ -0.8
TNXB-206ENST00000490077 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
TNXB-206ENST00000490077 CD5LO43866 347 aa10.08□□□□□ -0.8
TNXB-206ENST00000490077 UBE2E1P51965 193 aa10.08□□□□□ -0.8
TNXB-206ENST00000490077 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
TNXB-206ENST00000490077 MRPL35Q9NZE8 188 aaKnown RBP10.08□□□□□ -0.8
TNXB-206ENST00000490077 ITPR2Q14571 2701 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 CCDC144NLQ6NUI1 221 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 NRACQ8N912 160 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
TNXB-206ENST00000490077 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 CST9LQ9H4G1 147 aa10.07□□□□□ -0.8
TNXB-206ENST00000490077 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
TNXB-206ENST00000490077 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
TNXB-206ENST00000490077 SMIM17P0DL12 118 aa10.05□□□□□ -0.8
TNXB-206ENST00000490077 GCSHP23434 173 aa10.05□□□□□ -0.8
TNXB-206ENST00000490077 RIPPLY3P57055 190 aa10.05□□□□□ -0.8
TNXB-206ENST00000490077 ZNF48Q96MX3 618 aaPredicted RBP10.05□□□□□ -0.8
TNXB-206ENST00000490077 DUX5Q96PT3 197 aa10.05□□□□□ -0.8
TNXB-206ENST00000490077 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
TNXB-206ENST00000490077 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
TNXB-206ENST00000490077 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
TNXB-206ENST00000490077 GOSR1O95249 250 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 LGALS9BQ3B8N2 356 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 MS4A6AQ9H2W1 248 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 TRAV41A0A0B4J266 112 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 H3BUX3 64 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 BMI1P35226 326 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
TNXB-206ENST00000490077 A1L4Q6 167 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 ATP5G2Q06055 141 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 ARL3P36405 182 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 Q6AWC8 147 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 ZFAND2AQ8N6M9 145 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 METTL26Q96S19 204 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 OCIAD2Q56VL3 154 aa10.03□□□□□ -0.8
TNXB-206ENST00000490077 NOTCH2Q04721 2471 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 PF4V1P10720 104 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 C1orf122Q6ZSJ8 110 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 TRAV12-2A0A075B6T6 113 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 FCER1GP30273 86 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
TNXB-206ENST00000490077 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
TNXB-206ENST00000490077 A0A087WWL8 130 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 MGPP08493 103 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 RASL10AQ92737 203 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 VWFP04275 2813 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 A0A1B0GW15 77 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 AMTNQ6UX39 209 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
TNXB-206ENST00000490077 U3KQE9 123 aa10□□□□□ -0.81
TNXB-206ENST00000490077 GAGE10A6NGK3 116 aa10□□□□□ -0.81
TNXB-206ENST00000490077 KLHL30-AS1Q8NEE0 82 aa9.99□□□□□ -0.81
TNXB-206ENST00000490077 OPRPNQ99935 248 aaPredicted RBP9.99□□□□□ -0.81
TNXB-206ENST00000490077 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
TNXB-206ENST00000490077 Q9UF83 564 aa9.99□□□□□ -0.81
TNXB-206ENST00000490077 PRB1P04280 392 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
TNXB-206ENST00000490077 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 UFSP1Q6NVU6 142 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 VPS25Q9BRG1 176 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
TNXB-206ENST00000490077 IGKCP01834 107 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
TNXB-206ENST00000490077 IGHV1-69DA0A0B4J2H0 117 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms