RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 AGPAT4-IT1Q9H0P7 198 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SLC35B3Q9H1N7 401 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ATG5Q9H1Y0 275 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 NAA60Q9H7X0 242 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 BCL2L10Q9HD36 194 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 BET1LQ9NYM9 111 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 LSM2Q9Y333 95 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 DNAJC15Q9Y5T4 150 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 CHCHD2Q9Y6H1 151 aaPredicted RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 SERP1Q9Y6X1 66 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 KDM6AO15550 1401 aaPredicted RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 TROQ12816 1431 aaPredicted RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 MYOM3Q5VTT5 1437 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 RRBP1Q9P2E9 1410 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 A2ML1A8K2U0 1454 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 MED14O60244 1454 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ADGRL2O95490 1459 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ARHGAP35Q9NRY4 1499 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ARHGEF11O15085 1522 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 ZCCHC11Q5TAX3 1644 aaKnown RBP0.52□□□□□ -2.33
CCDC39-206ENST00000489868 PRDM2Q13029 1718 aa0.52□□□□□ -2.33
CCDC39-206ENST00000489868 A0A0D9SG52 128 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 LOC107986453A0A1B0GWG9 222 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 RBAKDNA6NC62 111 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 FAM24AA6NFZ4 105 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 ZNF736B4DX44 427 aaPredicted RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TMEM262E9PQX1 116 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 H3BQ15 152 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 M0R2P5 195 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 PDCD5O14737 125 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 LYRM1O43325 122 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 YPEL1O60688 119 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TIMM17BO60830 172 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 PITX3O75364 302 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 HYPMO75409 117 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SNCGO76070 127 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 NDUFB6O95139 128 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TCL1BO95988 128 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CYB5AP00167 134 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 APOC3P02656 99 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CD3DP04234 171 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SHBGP04278 402 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 IL5P05113 134 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 GYPBP06028 91 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 IGLC1P0CG04 106 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SAA1P0DJI8 122 aaPredicted RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CRYGAP11844 174 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SLC25A4P12235 298 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CKS2P33552 79 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SNCAP37840 140 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 ETV6P41212 452 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 NCAPD3P42695 1498 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 NPC2P61916 151 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 BLCAPP62952 87 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SUPT4H1P63272 117 aaKnown RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 MRPS36P82909 103 aaKnown RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 DEFA5Q01523 94 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 MIC13Q5XKP0 118 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 ALKAL2Q6UX46 152 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 PATE2Q6UY27 113 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 Q6ZS92 163 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 HECW1Q76N89 1606 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 ZFYVE16Q7Z3T8 1539 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TEX14Q8IWB6 1497 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 OR5AS1Q8N127 324 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 C3orf56Q8N813 242 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 OR2T35Q8NGX2 323 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 OR5AK2Q8NH90 309 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CLEC2BQ92478 149 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 AQP3Q92482 292 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 LSM10Q969L4 123 aaKnown RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SPTSSAQ969W0 71 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CHCHD1Q96BP2 118 aaKnown RBP0.51□□□□□ -2.33
CCDC39-206ENST00000489868 HYLS1Q96M11 299 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 DLC1Q96QB1 1528 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 DSCR8Q96T75 97 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 S100A13Q99584 98 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 KDM5DQ9BY66 1539 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 NPVFQ9HCQ7 196 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 SAR1AQ9NR31 198 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TAS2R4Q9NYW5 299 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 CEP164Q9UPV0 1460 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TPRKBQ9Y3C4 175 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00312Q9Y6C7 94 aa0.51□□□□□ -2.33
CCDC39-206ENST00000489868 TNRC6BQ9UPQ9 1833 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 BAZ1AQ9NRL2 1556 aaPredicted RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 MAPKBP1O60336 1514 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 MAP3K1Q13233 1512 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NISCHQ9Y2I1 1504 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 CFTRP13569 1480 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PLEKHH2Q8IVE3 1493 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 CLIP1P30622 1438 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 CPSF1Q10570 1443 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UACAQ9BZF9 1416 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PIGBOS1A0A0B4J2F0 54 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 IGHV1-24A0A0C4DH33 117 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 LOC107984156A0A0G2JMH3 177 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UBE2L5PA0A1B0GUS4 154 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 F8W1H4 67 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms