RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 TYMSP04818 313 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 IGHV3-30-5P0DP03 117 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 Q6ZSA8 131 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
FAM3D-204ENST00000489857 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
FAM3D-204ENST00000489857 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.82
FAM3D-204ENST00000489857 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
FAM3D-204ENST00000489857 HYLS1Q96M11 299 aa9.96□□□□□ -0.82
FAM3D-204ENST00000489857 OR5AC2Q9NZP5 309 aa9.96□□□□□ -0.82
FAM3D-204ENST00000489857 TRAV21A0A0B4J279 112 aa9.95□□□□□ -0.82
FAM3D-204ENST00000489857 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
FAM3D-204ENST00000489857 F6UZH7 168 aa9.95□□□□□ -0.82
FAM3D-204ENST00000489857 H0YIZ8 118 aa9.95□□□□□ -0.82
FAM3D-204ENST00000489857 EIF3GO75821 320 aaKnown RBP eCLIP9.95□□□□□ -0.82
FAM3D-204ENST00000489857 PFN1P07737 140 aaKnown RBP9.95□□□□□ -0.82
FAM3D-204ENST00000489857 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
FAM3D-204ENST00000489857 RPH3ALQ9UNE2 315 aa9.95□□□□□ -0.82
FAM3D-204ENST00000489857 C17orf112F2Z3M2 114 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 SIX6O95475 246 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 LELP1Q5T871 98 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 DPPA3Q6W0C5 159 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 Q8N3U1 123 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 SDF2L1Q9HCN8 221 aa9.94□□□□□ -0.82
FAM3D-204ENST00000489857 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 PGPA6NDG6 321 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 RS1O15537 224 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 LAGE3Q14657 143 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 RHOHQ15669 191 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 FFAR4Q5NUL3 377 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 CFAP126Q5VTH2 177 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 GOLT1AQ6ZVE7 132 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 PRADC1Q9BSG0 188 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 OTORQ9NRC9 128 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
FAM3D-204ENST00000489857 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
FAM3D-204ENST00000489857 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 LECT2O14960 151 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 ZNF876PQ49A33 203 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 LRRC37A5PQ49AS3 106 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 CMTM2Q8TAZ6 248 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 DEFB104AQ8WTQ1 72 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 ASB13Q8WXK3 278 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 KCNS1Q96KK3 526 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 TM2D2Q9BX73 214 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 TREM1Q9NP99 234 aa9.92□□□□□ -0.82
FAM3D-204ENST00000489857 TAS2R45P59539 299 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 ATP6V0E2Q8NHE4 81 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 ATP5SQ99766 215 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 GTSF1LQ9H1H1 148 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 MBD2Q9UBB5 411 aa9.91□□□□□ -0.82
FAM3D-204ENST00000489857 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.9□□□□□ -0.82
FAM3D-204ENST00000489857 FAM240BA0A1B0GVZ2 78 aa9.9□□□□□ -0.82
FAM3D-204ENST00000489857 CIDEAO60543 219 aa9.9□□□□□ -0.82
FAM3D-204ENST00000489857 GNG5P63218 68 aa9.9□□□□□ -0.82
FAM3D-204ENST00000489857 LINC01620Q4KN68 170 aa9.9□□□□□ -0.82
FAM3D-204ENST00000489857 NMES1Q9C002 83 aa9.9□□□□□ -0.82
FAM3D-204ENST00000489857 UBR4Q5T4S7 5183 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
FAM3D-204ENST00000489857 KRTAP10-4P60372 401 aaPredicted RBP9.89□□□□□ -0.83
FAM3D-204ENST00000489857 FAM74A1Q5RGS3 127 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 C9orf85Q96MD7 179 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 CCDC32Q9BV29 185 aa9.89□□□□□ -0.83
FAM3D-204ENST00000489857 PGPEP1LA6NFU8 196 aa9.88□□□□□ -0.83
FAM3D-204ENST00000489857 ZNF506Q5JVG8 444 aa9.88□□□□□ -0.83
FAM3D-204ENST00000489857 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
FAM3D-204ENST00000489857 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
FAM3D-204ENST00000489857 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
FAM3D-204ENST00000489857 TRAV8-3A0A0A6YYJ7 113 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 LINC00694P0DN24 101 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 MGST1P10620 155 aaKnown RBP9.87□□□□□ -0.83
FAM3D-204ENST00000489857 TMEM75Q8N9X5 138 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 HSPB11Q9Y547 144 aa9.87□□□□□ -0.83
FAM3D-204ENST00000489857 SERTAD4-AS1Q5TG53 156 aa9.86□□□□□ -0.83
FAM3D-204ENST00000489857 PQLC2Q6ZP29 291 aa9.86□□□□□ -0.83
FAM3D-204ENST00000489857 PTH2Q96A98 100 aa9.86□□□□□ -0.83
FAM3D-204ENST00000489857 GAGE12JA6NER3 117 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
FAM3D-204ENST00000489857 H2BFSP57053 126 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 RAB2AP61019 212 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 CYCSP99999 105 aaKnown RBP9.85□□□□□ -0.83
FAM3D-204ENST00000489857 GAGE1Q13065 139 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 GAGE4Q13068 117 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 GAGE5Q13069 117 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 ASAH1Q13510 395 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 GAGE13Q4V321 117 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 MZT2BQ6NZ67 158 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 SCGB1C1Q8TD33 95 aa9.85□□□□□ -0.83
FAM3D-204ENST00000489857 PPP1R1CQ8WVI7 109 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms