RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TMEM183BQ1AE95 376 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 SPXQ9BT56 116 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 TRAV34A0A0B4J273 112 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 PAGE4O60829 102 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 PFN1P07737 140 aaKnown RBP12.2□□□□□ -0.46
MDC1-206ENST00000489540 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
MDC1-206ENST00000489540 C8orf49Q96NF6 230 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
MDC1-206ENST00000489540 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 TRAV1-1A0A0B4J248 108 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 A0A1B0GV50 99 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 GCGP01275 180 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 SULT1A2P50226 295 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 OR5I1Q13606 314 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 ZFP30Q9Y2G7 519 aa12.19□□□□□ -0.46
MDC1-206ENST00000489540 TEX46H3BTG2 121 aa12.18□□□□□ -0.46
MDC1-206ENST00000489540 GNRH2O43555 120 aa12.18□□□□□ -0.46
MDC1-206ENST00000489540 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
MDC1-206ENST00000489540 C9orf62Q8N4C0 152 aa12.18□□□□□ -0.46
MDC1-206ENST00000489540 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
MDC1-206ENST00000489540 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
MDC1-206ENST00000489540 UBE2G1P62253 170 aa12.17□□□□□ -0.46
MDC1-206ENST00000489540 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
MDC1-206ENST00000489540 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 TRBV6-1A0A0K0K1D8 114 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 HOXA5P20719 270 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 RNF212Q495C1 297 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 Q86TA4 180 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 RASL10AQ92737 203 aa12.16□□□□□ -0.46
MDC1-206ENST00000489540 TRAV26-1A0A087WT03 109 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 H3BNG1 76 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 NUDT3O95989 172 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 TYMSP04818 313 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
MDC1-206ENST00000489540 AKR1C3P42330 323 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 COX8CQ7Z4L0 72 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
MDC1-206ENST00000489540 M0R2P5 195 aa12.14□□□□□ -0.47
MDC1-206ENST00000489540 CCL20P78556 96 aa12.14□□□□□ -0.47
MDC1-206ENST00000489540 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
MDC1-206ENST00000489540 C11orf21Q9P2W6 132 aa12.14□□□□□ -0.47
MDC1-206ENST00000489540 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
MDC1-206ENST00000489540 S100A1P23297 94 aa12.13□□□□□ -0.47
MDC1-206ENST00000489540 IFITM2Q01629 132 aa12.13□□□□□ -0.47
MDC1-206ENST00000489540 SLAQ13239 276 aa12.13□□□□□ -0.47
MDC1-206ENST00000489540 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
MDC1-206ENST00000489540 A0A0J9YY99 117 aa12.12□□□□□ -0.47
MDC1-206ENST00000489540 LTAP01374 205 aa12.12□□□□□ -0.47
MDC1-206ENST00000489540 FAM3BP58499 235 aaPredicted RBP12.12□□□□□ -0.47
MDC1-206ENST00000489540 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
MDC1-206ENST00000489540 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 CCL18P55774 89 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 FAM162BQ5T6X4 162 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 ZC2HC1AQ96GY0 325 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
MDC1-206ENST00000489540 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
MDC1-206ENST00000489540 CRIP1P50238 77 aa12.1□□□□□ -0.47
MDC1-206ENST00000489540 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
MDC1-206ENST00000489540 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
MDC1-206ENST00000489540 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 PAX4O43316 350 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 IFNA1P01562 189 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 ORM1P02763 201 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 FHL2Q14192 279 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 PTH2Q96A98 100 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
MDC1-206ENST00000489540 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 B4DEV8 164 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
MDC1-206ENST00000489540 ZNF876PQ49A33 203 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
MDC1-206ENST00000489540 SH2D1AO60880 128 aa12.07□□□□□ -0.48
MDC1-206ENST00000489540 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
MDC1-206ENST00000489540 ASIPP42127 132 aa12.07□□□□□ -0.48
MDC1-206ENST00000489540 BLOC1S1P78537 153 aa12.07□□□□□ -0.48
MDC1-206ENST00000489540 C11orf52Q96A22 123 aa12.07□□□□□ -0.48
MDC1-206ENST00000489540 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 C9JCJ5 164 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 PDE6DO43924 150 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 CIDEAO60543 219 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 SFTA3P0C7M3 94 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
MDC1-206ENST00000489540 CRYBA4P53673 196 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
MDC1-206ENST00000489540 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
MDC1-206ENST00000489540 MEF2BQ02080 365 aaPredicted RBP12.05□□□□□ -0.48
MDC1-206ENST00000489540 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
MDC1-206ENST00000489540 VAX2Q9UIW0 290 aa12.05□□□□□ -0.48
MDC1-206ENST00000489540 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
MDC1-206ENST00000489540 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms