RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 J3KRW8 73 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 RPS10P46783 165 aaKnown RBP5.75□□□□□ -1.49
SMC6-209ENST00000489535 CRIP1P50238 77 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 TCL1AP56279 114 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 RPL19P84098 196 aaKnown RBP5.75□□□□□ -1.49
SMC6-209ENST00000489535 CT83Q5H943 113 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 FAM162BQ5T6X4 162 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 GDF5OSQ5U4N7 250 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 EBLN2Q6P2I7 272 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 OR2D3Q8NGH3 330 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 FAM210BQ96KR6 192 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 SPAG8Q99932 426 aaPredicted RBP5.75□□□□□ -1.49
SMC6-209ENST00000489535 PYGO2Q9BRQ0 406 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 TMEM189A5PLL7 270 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 FABP5P3A8MUU1 101 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 DUSP14O95147 198 aaKnown RBP5.74□□□□□ -1.49
SMC6-209ENST00000489535 IGLV1-51P01701 117 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 GZMBP10144 247 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 DEFB131AP59861 70 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 FOXI2Q6ZQN5 318 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 OR2K2Q8NGT1 345 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 TSKUQ8WUA8 353 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 SAV1Q9H4B6 383 aaPredicted RBP5.74□□□□□ -1.49
SMC6-209ENST00000489535 MUC4Q99102 2169 aa5.74□□□□□ -1.49
SMC6-209ENST00000489535 SETD2Q9BYW2 2564 aaPredicted RBP5.74□□□□□ -1.49
SMC6-209ENST00000489535 TEP1Q99973 2627 aaKnown RBP5.74□□□□□ -1.49
SMC6-209ENST00000489535 TMSB15BA0A087X1C1 80 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 C1orf196B1AJZ1 125 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 SPINK4O60575 86 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 GPX1P07203 203 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 PRR9Q5T870 116 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 NUP35Q8NFH5 326 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 FAM19A4Q96LR4 140 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 NEU1Q99519 415 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 SRD5A3Q9H8P0 318 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 NAT8BQ9UHF3 227 aa5.73□□□□□ -1.49
SMC6-209ENST00000489535 ZNF256Q9Y2P7 627 aaPredicted RBP5.73□□□□□ -1.49
SMC6-209ENST00000489535 NACAE9PAV3 2078 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 TRBV7-9A0A0J9YWB2 115 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 XKRY2A2RUG3 117 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 KNCNA6PVL3 124 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 HIGD1CA8MV81 97 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 IGKV3-20P01619 116 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 ORM1P02763 201 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 TYMSP04818 313 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 HLA-DRB4P13762 266 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 CRISP2P16562 243 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 RNASE4P34096 147 aaKnown RBP5.72□□□□□ -1.49
SMC6-209ENST00000489535 LEPP41159 167 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 RPS20P60866 119 aaKnown RBP5.72□□□□□ -1.49
SMC6-209ENST00000489535 ODF3L2Q3SX64 289 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 MRPL54Q6P161 138 aaKnown RBP5.72□□□□□ -1.49
SMC6-209ENST00000489535 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 GTSF1Q8WW33 167 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 ODF3Q96PU9 254 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 GFRA4Q9GZZ7 299 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 HLA-DRB4X5D2U9 266 aa5.72□□□□□ -1.49
SMC6-209ENST00000489535 NIPBLQ6KC79 2804 aaeCLIP5.71□□□□□ -1.49
SMC6-209ENST00000489535 TRAV21A0A0B4J279 112 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 GRIFINA4D1Z8 144 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 FAM231BA6NCW3 169 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 OR11H12B2RN74 326 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 TRGC2P03986 189 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 RAB5BP61020 215 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 C9orf66Q5T8R8 295 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 Q6AWC8 147 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 C12orf54Q6X4T0 127 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 Q6ZQT7 251 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 APRG1Q8IVJ8 170 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 ZFP82Q8N141 532 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 SPATA3Q8NHX4 192 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 NAGKQ9UJ70 344 aa5.71□□□□□ -1.5
SMC6-209ENST00000489535 TRAV12-2A0A075B6T6 113 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 TRAV12-3A0A0B4J271 114 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 IGKV3D-20A0A0C4DH25 116 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 C7orf71A4D174 169 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 A8MTW9 85 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 SNURFLB1AK76 121 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 KLLNB2CW77 178 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 H3BMM0 161 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 M0R2Z0 102 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 FRMD6-AS1P0C7T7 363 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 TSPOP30536 169 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 CDKN1BP46527 198 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 CMC4P56277 68 aaPredicted RBP5.7□□□□□ -1.5
SMC6-209ENST00000489535 FXYD7P58549 80 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 SPINK13Q1W4C9 94 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 COX19Q49B96 90 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 WDR73Q6P4I2 378 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 ATP5L2Q7Z4Y8 100 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 C3orf56Q8N813 242 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 BORCS7Q96B45 105 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 TPPP3Q9BW30 176 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 KRTAP4-4Q9BYR3 166 aa5.7□□□□□ -1.5
SMC6-209ENST00000489535 TRAPPC1Q9Y5R8 145 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms